| #
f8efd71c
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| 15-Sep-2014 |
Hong Zhang <hzhang@mcs.anl.gov> |
make name of MatMatMultNumeric_MPIAIJ_MPIAIJ_xxx consistent with MatMatMultSymbolic
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| #
2cbc3277
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| 08-Aug-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'maint'
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| #
58030fe3
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| 07-Aug-2014 |
Hong Zhang <hzhang@mcs.anl.gov> |
Merge branch 'hzhang/mataxpy-bugfix' into maint
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| #
001ddc4f
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| 05-Aug-2014 |
Hong Zhang <hzhang@mcs.anl.gov> |
reduce code duplication for MatAXPYGetPreallocation_MPIXXX()
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| #
9c925a2c
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| 18-Mar-2014 |
Shri <abhyshr@mcs.anl.gov> |
Merge branch 'master' into shri/ts-events
Conflicts:
src/ts/interface/ts.c
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| #
5f6acfaf
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| 18-Mar-2014 |
Shri <abhyshr@mcs.anl.gov> |
Merge branch 'master' into shri/feature-dm-circuit
Conflicts:
src/dm/impls/makefile
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| #
c7ff62de
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| 13-Jan-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/wirth-fusion-materials
bad manual merge needs to be fixed
this is what happens when branches hang around too long
Conflicts:
src/ts/examples/tutorials/advection-dif
Merge branch 'master' into barry/wirth-fusion-materials
bad manual merge needs to be fixed
this is what happens when branches hang around too long
Conflicts:
src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c
show more ...
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| #
8c722d37
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| 10-Dec-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/reduce-dmsetup-da-memoryusage
Conflicts:
src/dm/examples/tests/ex15.c
src/dm/examples/tutorials/ex3.c
src/dm/impls/da/da2.c
src/dm/impls/da/da3.c
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| #
edbbd480
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| 10-Dec-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/xcode
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| #
cd4f0679
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| 18-Nov-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-dmda-section
* master: (528 commits)
Doc: Fixed configure doc
Nightly summary: Added configure section.
TSSetErrorIfStepFails: fix __FUNCT__
TS: fi
Merge branch 'master' into knepley/feature-dmda-section
* master: (528 commits)
Doc: Fixed configure doc
Nightly summary: Added configure section.
TSSetErrorIfStepFails: fix __FUNCT__
TS: fix for TSGetRHSMats_Private() in the creation of the Arhs and Brhs matrices
protect logging of objects (which uses global variables) with PETSC_USE_LOG
error handler API had been previously changed but this example was not updated to new API.
DMPlex: Fixed bug in coordinate permutation
PetscSection: Doc fix for permutation
Bib: Added Top500 and fixed entry
fun3d: update PetscMallocValidate() usage
bugfix of MatCreateSeqAIJFromTriple() contributed by Nicolas Marsic <nicolas.marsic@montefiore.ulg.ac.be>
bib: rename ref with duplicate key
Webpage: Corrected '-dm_mat_type cusp' to 'dm_mat_type aijcusp'.
completed removing server code that was not removed in previous commit
removed PETSc webserver and configure package files that supported it
Allow calling MatGetBlockSize[s]() before matrix preallocation
SNESLINESEARCHBT: Set the norms when exiting early due to negligible step.
fix outdated PetscOptionsList
SNESQN: only monitor real part of dot product (fails with C++ complex)
Fix for multiple definitions in mat/color/interface/ custom fortran bindings
...
Conflicts:
config/builder.py
include/petscdmplex.h
src/dm/impls/da/dageometry.c
src/dm/impls/plex/examples/tests/ex4.c
src/dm/impls/plex/plex.c
src/dm/impls/plex/plexinterpolate.c
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| #
c4fbd833
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| 08-Nov-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-fem-dgspace
* master: (593 commits)
Bib: Added Top500 and fixed entry
fun3d: update PetscMallocValidate() usage
bib: rename ref with duplicate key
Merge branch 'master' into knepley/feature-fem-dgspace
* master: (593 commits)
Bib: Added Top500 and fixed entry
fun3d: update PetscMallocValidate() usage
bib: rename ref with duplicate key
Webpage: Corrected '-dm_mat_type cusp' to 'dm_mat_type aijcusp'.
Allow calling MatGetBlockSize[s]() before matrix preallocation
SNESLINESEARCHBT: Set the norms when exiting early due to negligible step.
SNESQN: only monitor real part of dot product (fails with C++ complex)
Corrected the #include statement in the man pages for the PetscObjectComposedDataSet/Getwhatever routines.
DMPlex: Added doc for DMPlexGetHybridBounds()
winzip: detect if winzip is used to extract petsc.tar.gz and error out.
configure: remove self.archIndependent as its not being used. [it is used to create externalpackages/package/arch dir which is unused]
configure: fix packages using package-dir/PETSC_ARCH as out-of-source-build location Perhaps this should be changed to package-dir/build?
configure: remove dead code previously used to download BuildSystem
configure: check if compilerDefines [and compilerFixes] exist in framework before using them
configure: save/restore reconfigure.py when --with-clean is used
configure: add --with-clean option to delete buildfiles/externalpackages in PETSC_DIR/PETSC_ARCH and potential externalpackages in --with-external-package-dir/PETSC_ARCH
configure: With --with-externalpackages-dir=dir store/build packages in dir/PETSC_ARCH
Add MatSeqSBAIJSetPreallocationCSR()
configure: switch to using PETSC_DIR/PETSC_ARCH/externalpackages by updating package.py to use externalpackages.py as the externalPackagesDirProvider
configure: move dead code configureExternalPackagesDir() from petscdir.py to externalpackagesdir.py Also set PETSC_DIR/PETSC_ARCH/externalpackages as the externalpackagesdir
...
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| #
7737a228
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| 31-Oct-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/saws
Conflicts:
src/ksp/pc/impls/gamg/gamg.c
src/sys/classes/viewer/impls/ams/ams.c
src/sys/objects/pinit.c
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| #
a76eec0e
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| 25-Oct-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
Merge branch 'hzhang/snes-jacobiancoloropt'
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| #
a8971b87
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| 10-Oct-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
factor MatFDColoringSetUpBlocked_AIJ_Private() for both seqaij and mpiaij matrices; blocked impl works for mpiaij now
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| #
93dfae19
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| 09-Oct-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
implement MatFDColoringCreate_SeqXAIJ() s.t. it sets default brows and bcols.
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| #
f86b9fba
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| 09-Oct-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
add MatFDColoringSetUp(); rename MatFDColoringCreate_xxx -> MatFDColoringSetUp_xxx
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| #
59507afe
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| 06-Oct-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
Merge branch 'hzhang/snes-jacobiancoloropt' of bitbucket.org:petsc/petsc into hzhang/snes-jacobiancoloropt
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| #
e3225e9d
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| 25-Sep-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
cleanup MatFDColoringCreate_MPIXAIJ()
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| #
040ebd07
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| 25-Sep-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
replace old impl of MatFDColoring routines with new ones.
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| #
256ff83f
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| 11-Sep-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/wirth-fusion-materials
Conflicts:
src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c
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| #
cc85fe4d
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| 04-Sep-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/dmvecmattypes' into barry/saws
Needed to work with version of PETSc that did not have constant calls to VecSetFromOptions() etc
Conflicts:
src/ksp/ksp/interface/ams/kspams.c
s
Merge branch 'barry/dmvecmattypes' into barry/saws
Needed to work with version of PETSc that did not have constant calls to VecSetFromOptions() etc
Conflicts:
src/ksp/ksp/interface/ams/kspams.c
src/snes/impls/composite/snescomposite.c
src/snes/impls/gs/snesgs.c
src/snes/impls/nasm/nasm.c
src/snes/impls/ngmres/snesngmres.c
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| #
459e96c1
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| 28-Aug-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-refine-3d
* master: (273 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib
Merge branch 'master' into knepley/feature-plex-refine-3d
* master: (273 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib entries
Bib: Updates
AO: fix erroneous processing of -ao_view and factor into AOViewFromOptions
doc: fix named argument in {Vec,Mat,DM}ViewFromOptions
Sys: add PetscDataTypeFromString() and test code
Mat: Should say that it has a nullspace in MatView()
parms: update tarball with fix for namespace conflict with metis
fix citation 'Golub_Varga_1961'
parmetis: update tarball to parmetis-4.0.2-p5 which fixes an install issue with cygwin
Sys Logging: revert parent traversal
fixed hdf5.py so that if self.libraries.compression is None the code still runs correctly
DMDA: fix bad cast of DM_DA to PetscObject
MatClique: follow DistMultiVec API changes
MatClique: remove unused variables
config cmakeboot: add C++ flags any time compiler is available
config OpenMP: check for C++ flag any time the compiler is available
replaced all left-over uses of a single PetscMalloc() to allocated multiple arrays: replaced with PetscMallocN() The only ones left are when the second array is set into the first array and one ugly usage in the MUMPS interface that cannot be easily fixed
...
Conflicts:
include/petscdmplex.h
show more ...
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| #
c0c93d0e
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| 28-Aug-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-dmda-section
* master: (287 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib e
Merge branch 'master' into knepley/feature-dmda-section
* master: (287 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib entries
Bib: Updates
AO: fix erroneous processing of -ao_view and factor into AOViewFromOptions
doc: fix named argument in {Vec,Mat,DM}ViewFromOptions
Sys: add PetscDataTypeFromString() and test code
Mat: Should say that it has a nullspace in MatView()
parms: update tarball with fix for namespace conflict with metis
fix citation 'Golub_Varga_1961'
parmetis: update tarball to parmetis-4.0.2-p5 which fixes an install issue with cygwin
Sys Logging: revert parent traversal
fixed hdf5.py so that if self.libraries.compression is None the code still runs correctly
DMDA: fix bad cast of DM_DA to PetscObject
MatClique: follow DistMultiVec API changes
MatClique: remove unused variables
config cmakeboot: add C++ flags any time compiler is available
config OpenMP: check for C++ flag any time the compiler is available
replaced all left-over uses of a single PetscMalloc() to allocated multiple arrays: replaced with PetscMallocN() The only ones left are when the second array is set into the first array and one ugly usage in the MUMPS interface that cannot be easily fixed
...
show more ...
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| #
e88ab3e4
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| 05-Aug-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
Merge branch 'hzhang/mat-redundant'
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| #
b2bf6370
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| 01-Aug-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
rm psubcomm from MatGetRedundantMatrix() because Jed does not like it :-(
|