| #
df750dc8
|
| 17-Feb-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
add MatDestroySubMatrices(); bugfix
|
| #
fb2a4d40
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| 15-Feb-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/hzhang/fix-matcreate-null-a'
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| #
171f813e
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| 15-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
Merge remote-tracking branch 'origin/knepley/feature-fe-dual-apply' into tisaac/feature-fe-dual-apply
* origin/knepley/feature-fe-dual-apply: (75 commits)
Plex: Screwed up last fix
Plex: Fix ove
Merge remote-tracking branch 'origin/knepley/feature-fe-dual-apply' into tisaac/feature-fe-dual-apply
* origin/knepley/feature-fe-dual-apply: (75 commits)
Plex: Screwed up last fix
Plex: Fix overeager protection of function
PetscFE: Fixed declaration
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newer macOS image
clarify damping and other issues related to SNESLINESEARCHBASIC
change example in new harness to use simple partitioner so gets consistent output on all systems
remove unused function from test file
cleanup formatting in example, plus myrank not rank
all requires need to go on the same line in test definition otherwise they are skipped
missing - makes the manual page formatting wrong
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
fix typo and cut and paste error in docs
bugfix for !HYPRE
fix warning for ';;'
may switch to scalable only when B->cmap->N > 100000
MatLRC: store in the context the parallel matrices rather than the sequential ones
Bib: Add ref
set default algorithm based on B->cmap->N for MatMatMult_MPIAIJ_MPIAIJ()
Error in VecScatterView_MPI() had the meaning of from and to backwards
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| #
c5eaf5f0
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| 14-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-fe-dual-apply
* knepley/feature-plex-tests-new: (73 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to s
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-fe-dual-apply
* knepley/feature-plex-tests-new: (73 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newer macOS image
clarify damping and other issues related to SNESLINESEARCHBASIC
change example in new harness to use simple partitioner so gets consistent output on all systems
remove unused function from test file
cleanup formatting in example, plus myrank not rank
all requires need to go on the same line in test definition otherwise they are skipped
missing - makes the manual page formatting wrong
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
fix typo and cut and paste error in docs
bugfix for !HYPRE
fix warning for ';;'
may switch to scalable only when B->cmap->N > 100000
MatLRC: store in the context the parallel matrices rather than the sequential ones
Bib: Add ref
set default algorithm based on B->cmap->N for MatMatMult_MPIAIJ_MPIAIJ()
Error in VecScatterView_MPI() had the meaning of from and to backwards
fix build warning as reported by the nightly tests
Update alquimia.py to use Glenn's branch that updates alquimia for pflotran xsdk
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| #
cffa9059
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| 14-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (94 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newe
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (94 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newer macOS image
clarify damping and other issues related to SNESLINESEARCHBASIC
change example in new harness to use simple partitioner so gets consistent output on all systems
remove unused function from test file
cleanup formatting in example, plus myrank not rank
missing - makes the manual page formatting wrong
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
fix typo and cut and paste error in docs
bugfix for !HYPRE
fix warning for ';;'
may switch to scalable only when B->cmap->N > 100000
MatLRC: store in the context the parallel matrices rather than the sequential ones
Bib: Add ref
set default algorithm based on B->cmap->N for MatMatMult_MPIAIJ_MPIAIJ()
Error in VecScatterView_MPI() had the meaning of from and to backwards
fix build warning as reported by the nightly tests
Update alquimia.py to use Glenn's branch that updates alquimia for pflotran xsdk
fix divide by zero exposed by 8534686b5096cd4c91a8f3895408b386c0628431 - and produced by petsc4py testsuite
...
Conflicts:
src/dm/impls/plex/examples/tests/ex13.c
src/dm/impls/plex/plexgmsh.c
src/snes/examples/tests/ex2.c
src/snes/examples/tests/output/ex2_3.out
src/snes/examples/tests/output/ex2_4.out
src/snes/examples/tests/output/ex2_5.out
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| #
43e49210
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| 13-Feb-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
bugfix for '-mat_view' when matvalue array = null
Reported-by: Pierre Jolivet <pierre.jolivet@enseeiht.fr>
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| #
7962258a
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| 10-Feb-2017 |
Scott Kruger <scott.e.kruger@gmail.com> |
Merge branch 'master' into scott/test-harness-forloopfix
|
| #
eb54a165
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| 09-Feb-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
Merge branch 'hzhang/opt-matgetsubmatrices-mpibaij'
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| #
0d0f1ffd
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| 08-Feb-2017 |
Scott Kruger <scott.e.kruger@gmail.com> |
Merge branch 'master' into scott/test-harness-forloopfix
|
| #
a21198ab
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| 07-Feb-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Always check for missing rows that are being zeroed
Thanks-to: Jan Blechta
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| #
8761c3d6
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| 31-Jan-2017 |
Hong Zhang <hzhang@mcs.anl.gov> |
bugfix for MatCreateRedundantMatrix(), MatCreateMPIMatConcatenateSeqMat()
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| #
89f99644
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| 28-Jan-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'maint'
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| #
611b75b0
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| 28-Jan-2017 |
BarryFSmith <bsmith@mcs.anl.gov> |
Merged in ericch/petscforkeric/chamberland/fix_MatZeroRows_SeqAIJ_debug_mode (pull request #621)
BUG: Fix the debug_mode for abusive missing diagonal check
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| #
03e8432d
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| 25-Jan-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (37 commits)
fortran: include petscversion.h
test: c++ pipeline build fix for d2a797cfef64a79a330b420f01b2d605a8acc690
Extra
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (37 commits)
fortran: include petscversion.h
test: c++ pipeline build fix for d2a797cfef64a79a330b420f01b2d605a8acc690
Extract the submatrices
Convert C Null pointer to Fortran in Fortran stub before passing back to user
PC Galekin and KSP should properly propagate calls to SetFromOptions to subsolvers
Converted Fortran PetscSF to Fortran type, added PETSC_NULL_SF
clarification in documentation
Update of petscdiff and associated harness hooks
Fixup more F90 interface definitions for users
More space-in-dirname enabling quotes
Enable paths with spaces
add cast; bugfix for 64bit
Typo -- initialized TESTFLAGS to -v by mistake
Adding new options to test framework
gtest: add valgrind support [when PETSC_ARCH has 'valgrind' in the name]
bugfix for unsorted ISCols
optimize matgetsubmatrices_mpiaij to use only one MPI_AllReduce
small cleanup MatGetSubMatrices_MPIAIJ_Local()
rm allcolumns from the input of MatGetSubmatrices_mpiaij_local()
add a test to ex4.c for reuse
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| #
c3c607cc
|
| 20-Jan-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Fixup more F90 interface definitions for users
Time: .15 hours
Reported-by: Manuel Valera <mvalera@mail.sdsu.edu>
|
| #
c7da8527
|
| 18-Jan-2017 |
Eric Chamberland <ericc@giref.ulaval.ca> |
BUG: Fix the debug_mode for abusive missing diagonal check
also remove any missing diagonal verification if not in debug mode.
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| #
b358f029
|
| 17-Jan-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/fix-plex-examples-cleanup
* master: (156 commits)
Doc: Added headers for documentation sections
Bib: Small corrections
doc: update example makefiles with del
Merge branch 'master' into knepley/fix-plex-examples-cleanup
* master: (156 commits)
Doc: Added headers for documentation sections
Bib: Small corrections
doc: update example makefiles with deleted sourcefile info
doc: fix manual build errors
doc: fix SOURCEH for some fortran includes that got moved
doc: fix broken manualpages - bug introduced by 1b266c9
MatMissingDiagonal() is actually not a collective operation
PetscFECreateDefault(): allow 0th order quadrature
fix gmakegentest.py to ignore *.xx files that are not source code but are in the files
increase table input size to (A->cmap->n + a->B->cmap->N) for MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ()
gtest: add TEST and RM clean output for Satish
gtest: set PATH for windows DLL tests, and enable -Dpetsc_EXPORTS only during (dll) build - and not for examples
gtest: use target-specific var to deduplicate FC rules for modules
gtest: for 'allgtest' and 'allgtest-tap' - use V=0 instead of 'grep -v CC' etc..
gtest: quiet absoft compiler commands [so they can be filtered].
remove incorrect requires from more test files, remove output from -fp_trap example in test because it cannot be machine independent
gtest: windows fixes. add filter to remove filename from compiler stdout. And fix filters to use petscdiff
Removed generated requires in the wrong place from test examples.
Fix test output for additional information printed about computed eigenvalues
gtest: fix ex5f.F to use 'format' so that the output from ifort matches the one from gfortran
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| #
bf6bf7c2
|
| 15-Jan-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/add-MatSeqSBAIJGetArray'
|
| #
8397e458
|
| 07-Jan-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Add MatSeqSBAIJGetArray() and MatSeqSBAIJRestoreArray()
Interestingly the private functions for SABIJ where already in the source code
Time: .15 hours
Reported-by: Eric Chamberland <Eric.Chamberland
Add MatSeqSBAIJGetArray() and MatSeqSBAIJRestoreArray()
Interestingly the private functions for SABIJ where already in the source code
Time: .15 hours
Reported-by: Eric Chamberland <Eric.Chamberland@giref.ulaval.ca>
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|
| #
1a4b332b
|
| 29-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/minor-cleanup'
|
| #
390e1bf2
|
| 25-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Minor cleanup, remove some outdated code, remove unneeded constructs, improve manual pages slightly, add missing test case
Time: 2.5 hours
|
| #
9137bce6
|
| 24-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/remove-funct'
|
| #
b90ca41c
|
| 24-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/fix-matreuse'
|
| #
cf37664f
|
| 23-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Add more error checks for use of MatReuse; change MatTranspose() to use MatReuse as used by other functions
Time: 2.5 hours
Reported-by: Stefano Zampini <stefano.zampini@gmail.com>, Eric Chamberlan
Add more error checks for use of MatReuse; change MatTranspose() to use MatReuse as used by other functions
Time: 2.5 hours
Reported-by: Stefano Zampini <stefano.zampini@gmail.com>, Eric Chamberland <Eric.Chamberland@giref.ulaval.ca>
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| #
71752422
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| 21-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/half-precision'
|