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e856b924
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| 28-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'maint'
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41096f02
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| 28-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
prevent a possible segfault when m is 0 (or less)
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3d996552
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| 19-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/docs/website/documentation/changes/dev.html src/ksp/ksp/examples/tutorials/ex59.c src/ksp/pc/impls/bddc/bddc.c
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/docs/website/documentation/changes/dev.html src/ksp/ksp/examples/tutorials/ex59.c src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcfetidp.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/impls/bddc/bddcschurs.c src/mat/impls/is/matis.c src/mat/impls/is/matis.h
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| #
94d335fd
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| 07-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'maint'
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82030b31
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| 07-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'stefano_zampini/fix-matgetrowij' into maint
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2462f5fd
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| 28-Jun-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Fix bugs in MatGetRowIJ_SeqBAIJ and MatGetRowIJ_SeqSBAIJ
MatGetRowIJ_SeqBAIJ had a bug for blockcompressed case and shift ==1 MatGetRowIJ_SeqSBAIJ was almost completely broken: the code is now a dup
Fix bugs in MatGetRowIJ_SeqBAIJ and MatGetRowIJ_SeqSBAIJ
MatGetRowIJ_SeqBAIJ had a bug for blockcompressed case and shift ==1 MatGetRowIJ_SeqSBAIJ was almost completely broken: the code is now a duplicate of MatGetRowIJ_SeqBAIJ Added an extra PetscBool parameter to MatToSymmetricIJ_SeqAIJ to select whether to symmetrize the lower triangular or the upper triangular part (default is lower triangular, as before); this is needed by MatGetRowIJ_SeqBAIJ to work properly
Added ex26.c to test MatGetRowIJ for SEQAIJ,SEQBAIJ and SEQSBAIJ
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bef83e63
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| 23-May-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcprivate.c src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
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7caaeba4
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| 19-May-2016 |
barral <none@none.fr> |
Merge branch 'master' into barral/feature-dmplex-adapt
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3546dc83
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| 17-May-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'jose/maint/tabs-print-class' into maint
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de18c742
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| 16-May-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-parallel-mesh-load
* master: (59 commits) Increase patchlevel to 3.7.1 Fix manual page for MatGetTransposeNullSpace() remove unneeded use of PetscCon
Merge branch 'master' into knepley/feature-parallel-mesh-load
* master: (59 commits) Increase patchlevel to 3.7.1 Fix manual page for MatGetTransposeNullSpace() remove unneeded use of PetscContainer to hold iscoloring in SNESComputeNGSDefaultSecant() added SNESView for ngs, added options database to ngs manual page, removed dead routine gcov: enable in mpiuni test incorrect capitalization of an even name force same number of iterations for output of ml example changed output for ml example to not be machine dependent DMP4est: access data after setup SNESLineSearch_Apply was labeled with PETSC_EXTERN in one place but when declared this was not visible hence library build failed under Microsoft. Example had print statements of complex numbers Fix more errors in agmres for 64 bit integers builds: fix nampespase conflict with 'analyzer-buid' and checkBuilds.py gcov: add more packages to test add a couple of KSP that were not represented in testing gcov: enable more externalpackages for this test fixes for agmres for 64 bit indices, fix for findvisibleprivatefunctions to be portable for Mac and Linux get GAMG to get null space (more) fix c++ compile errors Add test example for kacmarz preconditioner since gcov indicated there was NONE ...
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18790e9c
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| 14-May-2016 |
Mark Adams <cal2princeton@yahoo.com> |
Merge branch 'master' of bitbucket.org:petsc/petsc into mark/gamg-nullspacefix
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93f203bf
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| 14-May-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/cleanup-external-mat-solver-packages'
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65002f03
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| 14-May-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/make-functions-static'
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367daffb
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| 11-May-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Updated script for detecting visible symbols
Removed unneeded visibility of some symbols Fixed some namespacing Removed the use of unneeded implementation includes in the TAO code
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95dc64fa
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| 06-May-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
removed bstream code since it was not in nightly tests and broken
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35d70571
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| 04-May-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcgraph.c src/ksp/pc/impls/bddc/bddcprivate.c
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147f402e
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| 16-Apr-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'hzhang/matpackage-type'
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f6224b95
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| 14-Apr-2016 |
Hong Zhang <hzhang@mcs.anl.gov> |
set solvertype for inplace MatxxxFactor()
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c20ebc76
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| 22-Mar-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
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9be3f403
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| 19-Mar-2016 |
Lisandro Dalcin <dalcinl@gmail.com> |
Merged in dalcinl/draw-null (pull request #434)
PetscDraw: Proper implementation of PETSC_DRAW_NULL
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45f3bb6e
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| 18-Mar-2016 |
Lisandro Dalcin <dalcinl@gmail.com> |
PetscDraw: Proper implementation of PETSC_DRAW_NULL
* Remove special casing of PETSC_DRAW_NULL in the draw interface * Rework handling of PETSC_DRAW_NULL in Draw{Axis|LG|SP|BAR|HG} * Some 'extern' -
PetscDraw: Proper implementation of PETSC_DRAW_NULL
* Remove special casing of PETSC_DRAW_NULL in the draw interface * Rework handling of PETSC_DRAW_NULL in Draw{Axis|LG|SP|BAR|HG} * Some 'extern' -> 'PETSC_INTERN' fixes * Add missing error checking
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| #
992dc9be
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| 18-Mar-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-handle-func-failure
* master: (378 commits) SNES ex5: Fix coordinate determination for empty subdomains fixed petsc.bib entry p4est: fix syntax
Merge branch 'master' into knepley/feature-plex-handle-func-failure
* master: (378 commits) SNES ex5: Fix coordinate determination for empty subdomains fixed petsc.bib entry p4est: fix syntax error with error message SNES ex5: Correct Jacobian handling on patches SNES ex5: Stupid complex fixes DMP4est: fix transfer of labels to parents petsc4py: update to latest snapshot. Fixes da example breakage in petsc4py test suite Plex: Correct setting of options on refined or coarsened meshes Plex: Add info for grid hashing Plex: Add logging in interpolator creation Plex: Correct use of tabs in ASCII viewer DM: Shorten long event name Plex ex12: Create boundary label automatically at all levels of mesh hierarchy Plex ex12: Change PetscViewerSetFormat --> PetscViewerPushFormat - Fix order of SetMode and SetFilename Plex ex12: Change all functions to static Since DMDA with periodic boundary conditions does support P0 interpolation remove checks that error out under those conditions ascem-io.py and amanzi.py need to handle self.hdf5.include being None correctly fix MPI Uni to recycle communicators so it won't run out like with the petsc4py tests also fix check for location of python shared library on mac to check all cases each time Switch back to Sherry's version since she accepted by pull request PetscDraw: Update help messages for -draw_save* options ...
Conflicts: src/dm/impls/plex/plexfem.c
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| #
3afb9657
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| 16-Mar-2016 |
Dave May <dave.mayhem23@gmail.com> |
Merged petsc/petsc into master
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f55fe9e4
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| 14-Mar-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/fix-private-functions'
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e2d3c13c
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| 09-Mar-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge remote-tracking branch 'origin/knepley/fix-plex-hdf5-label' into tisaac/dmforest
* origin/knepley/fix-plex-hdf5-label: (50 commits) Plex: Fixed HDF5 output for DMLabel - The ISAllGather() wa
Merge remote-tracking branch 'origin/knepley/fix-plex-hdf5-label' into tisaac/dmforest
* origin/knepley/fix-plex-hdf5-label: (50 commits) Plex: Fixed HDF5 output for DMLabel - The ISAllGather() was being called with an IS that had COMM_SELF - Also, we needed to protect for empty index arrays superlu_dist: install target should first make sure prefix/[include,lib] dirs exist - similar to superlu dm: add DMRemoveLabel() fortran interface nightlybuilds: allocate more time to run arch-linux-xsdk-dbg build... Remove superfluous information messages Cannot have rank 1 print before parallel print since it may end up before or after the print from process 0. There change to have rank 0 print the sequential matrix Bib: Added ref Plex: Update ex12_5 with correct level-2 overlap DMLabel: Add missing cleanup for DMLabelGather() mpiuni: check for "long_long" before checking for "__int64" [as "typedef __int64" gives error with icc] Note: cannot use 'int64_t' as 'typedef unsigned int64_t foo' gives eror with icc Add filter for solaris linker scope warning to master since that is used in nightly tests of next Previous commit did not correctly handle downloading from --with-packages-dir Use special error code of 10 for output list of needed downloaded package tarballs otherwise the outer configure.py script converts the error code to an error message we do not want. Have ./configure return a nonzero exit code when --with-packages-dir detects missing packages so that calling scripts know this is occurred simplify some code Completed support for --with-packages-dir=directory that allows --download-xxx features to be cleanly used behind firewalls etc also updated to docs to indicate this new feature Adding supporting for --download-xxx to reported needed downloads when off line or behind a firewall and using local copies when available with the --with-packages-dir=directory option Fix typos in linesearch impls:armijo, morethuente, owarmijo. PetscDraw: Explicitly save draw in KSP/SNES/TS monitors PetscViewerDraw: Propagate prefix from viewer to draw contexts PetscDraw: Explicitly save draw in {Vec|Mat|DMDA}View() routines ...
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