logging memory now credits to all ancestors

Use classname in object for object name when calling PetscObjectPrintClassNamePrefixType() instead of some string with less precise name passed in

Merge branch 'jed/stack-call-blas'

Fix performance bug that calling BLAS takes an amount of time dependent
on the number of memory allocations that the program has made.

* jed/stack-call-blas:
Pe

Merge branch 'jed/stack-call-blas'

Fix performance bug that calling BLAS takes an amount of time dependent
on the number of memory allocations that the program has made.

* jed/stack-call-blas:
PetscStackCallBLAS: new macro instead of PetscStackCall (skip CHKMEMQ)
Stack: consolidate handling of PetscStack

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Merge branch 'toby/fix-sor-baij'

Shell portability and silence bad compiler warning.

* toby/fix-sor-baij:
MatSOR_SeqBAIJ: initialize work for pedantic compilers.
KSP test: avoid bash4 case synt

Merge branch 'toby/fix-sor-baij'

Shell portability and silence bad compiler warning.

* toby/fix-sor-baij:
MatSOR_SeqBAIJ: initialize work for pedantic compilers.
KSP test: avoid bash4 case syntax ';&' in favor of simpler alternative

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MatSOR_SeqBAIJ: initialize work for pedantic compilers.

The work variable is initialized in a macro within a do{}while(0) construct:
some compilers don't realize that this initialization always happ

MatSOR_SeqBAIJ: initialize work for pedantic compilers.

The work variable is initialized in a macro within a do{}while(0) construct:
some compilers don't realize that this initialization always happens, so they
complain about uninitialized values. This protects against those warnings.

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Merge branch 'toby/fix-sor-baij'

Consolidates code and adds support for BAIJ SOR with nonzero initial
guess (required for use as a MG smoother).

* toby/fix-sor-baij:
Mat: add MatSOR/BAIJ test to

Merge branch 'toby/fix-sor-baij'

Consolidates code and adds support for BAIJ SOR with nonzero initial
guess (required for use as a MG smoother).

* toby/fix-sor-baij:
Mat: add MatSOR/BAIJ test to nightlies
Mat: move new MatSOR macros to a common header blockmatmult.h
MatSOR_SeqBAIJ: refactor, enable nonzero initial guess.
MatSOR, test ex43: removed BlockMat from test
MatSOR: added test ex43, currently fails
MatSOR_SeqBAIJ: protect against zero vector length

Conflicts:
src/ksp/ksp/examples/tests/makefile

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PetscStackCallBLAS: new macro instead of PetscStackCall (skip CHKMEMQ)

When CHKMEMQ occurs on every call to BLAS or Lapack, we sometimes see
unacceptable performance degradation (orders of magnitude

PetscStackCallBLAS: new macro instead of PetscStackCall (skip CHKMEMQ)

When CHKMEMQ occurs on every call to BLAS or Lapack, we sometimes see
unacceptable performance degradation (orders of magnitude).
PetscStackCallBLAS is currently identical to PetscStackCall except for
skipping CHKMEMQ, but such checking could be made optional in the
future.

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Mat: move new MatSOR macros to a common header blockmatmult.h

These macros would be useful for condensing the BAIJ triangular solve
code, for example.

Merged petsc/petsc into rmills/petsc master

Merge branch 'barry/rm-xxxregisterdynamic'

* barry/rm-xxxregisterdynamic:
Registration: remove stale 'XXRegisterDynamic)' entries in man pages
TS examples: fix use of PetscFunctionList and add t

Merge branch 'barry/rm-xxxregisterdynamic'

* barry/rm-xxxregisterdynamic:
Registration: remove stale 'XXRegisterDynamic)' entries in man pages
TS examples: fix use of PetscFunctionList and add to nightlies
Changes: Note updates to XRegisterDynamic/PetscObjectComposeFunctionDynamic
PetscObjectComposeFunctionDynamic: remove stale docs and usage
developers.tex: remove complications from function composition with dlls
removed string version of function name for XXXRegister(), PetscFunctionListAdd() and PetscObjectComposeFunction()
changes: document PetscFunctionListAdd() API change
developers.tex: update documentation of PetscObjectComposeFunction
removed path and MPI_Comm arguments from PetscFunctionListFind/Add()
removed path argument to XXXInitializePackage() and XXXRegister()
removed XXXRegisterDynamic() but kept the APIs for everything else underneath the same phase I of the update to handling registering function pointers

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MatSOR_SeqBAIJ: refactor, enable nonzero initial guess.

At the cost of a couple of conditionals per iteration, the various
MatSOR_SeqAIJ_# functions are combined.

Passes make testexamples, includin

MatSOR_SeqBAIJ: refactor, enable nonzero initial guess.

At the cost of a couple of conditionals per iteration, the various
MatSOR_SeqAIJ_# functions are combined.

Passes make testexamples, including recently added ksp test ex43

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MatSOR_SeqBAIJ: protect against zero vector length

Merge branch 'master' of bitbucket.org:petsc/petsc

Merged petsc/petsc into rmills/petsc master

Merge branch 'barry/rm-xxxregisterdynamic' into jed/ts-eimex

PetscObjectComposeFunctionDynamic() and TSRegisterDynamic() were
replaced by PetscObjectComposeFunction() and TSRegister(), both of which

Merge branch 'barry/rm-xxxregisterdynamic' into jed/ts-eimex

PetscObjectComposeFunctionDynamic() and TSRegisterDynamic() were
replaced by PetscObjectComposeFunction() and TSRegister(), both of which
drop the string name argument.

* barry/rm-xxxregisterdynamic: (82 commits)
...

Conflicts:
src/ts/interface/tsregall.c

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removed string version of function name for XXXRegister(), PetscFunctionListAdd() and PetscObjectComposeFunction()

removed excessive use of CHKMEMQ;

Merge branch 'master' into barry/ams

Conflicts:
include/petscviewer.h
src/sys/classes/viewer/interface/viewreg.c
src/sys/threadcomm/interface/threadcomm.c

Merge branch 'master' of bitbucket.org:petsc/petsc into knepley/plex

Warnings: clean compile with gcc-4.8 at -Wextra -Wno-unused-parameter

* Mostly fills out some ops struct declarations. Reformatted so Emacs
can help with alignment. Squelch whitespace in diff to s

Warnings: clean compile with gcc-4.8 at -Wextra -Wno-unused-parameter

* Mostly fills out some ops struct declarations. Reformatted so Emacs
can help with alignment. Squelch whitespace in diff to see useful
changes.

* Use struct instead of casting to data pointer (void*) when serializing
function pointers.

* strcasecmp is in strings.h

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Merge branch 'master' into jed/ts-eimex

Sync to include Git conversion, PETSC_EXTERN, and minor API changes.

Conflicts:
src/ts/interface/tsregall.c

moved "macro" kernel interfaces to petsc-private/kernels

Hg-commit: a5f14392b251a7db2c640b6be7e611f6c23ef9ea

Automerge.

Hg-commit: b6659d546870fb013f3da5bcd5066d1dc0dc329c

Merge branch 'master' of gitifyhg::ssh://hg@bitbucket.org/BarryFSmith/petsc-dev-simp

Symbol visibility and namespacing.

C++ builds always set extern "C" and can be called from plain C. Most
users w

Merge branch 'master' of gitifyhg::ssh://hg@bitbucket.org/BarryFSmith/petsc-dev-simp

Symbol visibility and namespacing.

C++ builds always set extern "C" and can be called from plain C. Most
users will only want --with-clanguage=C++ for std::complex.


Hg-commit: f848d02318cae92d7b32037c7ee88f92dbe46347

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Change all PETSC_EXTERN_C to PETSC_EXTERN

Hg-commit: 8d2ebbb193fb583bccc64015e35640c4e08c3426