Merge branch 'jacobf/2022-10-25/cleanup-dangling-seterrq' into 'main'

Clean up some dangling seterrqs

See merge request petsc/petsc!5769

clean up some dangling seterrqs

Merge branch 'jacobf/2022-09-21/2-bike-2-shed' into 'main'

Feature: Bicycle Storage Facility 2

See merge request petsc/petsc!5661

source code format changes due to .clang-format changes

Merge branch 'jacobf/2022-09-17/slimmer-petscobject' into 'main'

Feature: Slimmer PetscObject

See merge request petsc/petsc!5649

Remove parent, parentid, flops, time, mem, and memchildren. Deprecate PetscLogObjectParent(), PetscLogObjectMemory(), and PetscNewLog()

Merge branch 'barry/2022-08-15/fix-mat-manpages' into 'main'

Man pages in mat directory, manual material on matrices

See merge request petsc/petsc!5539

Fix manual pages in src/mat directory, very minor source code change

Commit-type: documentation
/spend 22h

Merge branch 'jolivet/fix-style-one-liners' into 'main'

Remove braces from one-liners w/o PetscCall()

See merge request petsc/petsc!5561

Remove braces from one-liners w/o PetscCall()

Merge branch 'jolivet/fix-style-one-liners' into 'main'

Remove braces from one-liners

See merge request petsc/petsc!5557

Remove braces from one-liners

Merge branch 'barry/2022-08-21/clang-format-source' into 'main'

format repository with clang-format

See merge request petsc/petsc!5541

clang-format: convert PETSc sources to comply with clang-format

Merge branch 'barry/2022-07-16/fix-mattranspose' into 'main'

Symbolic/numeric stages vs MatReuse flag discussion and additions to MatTranspose

See merge request petsc/petsc!5438

Update handling of MatTranspose() with MAT_REUSE_MATRIX

Add error checking for the use of the MAT_REUSE_MATRIX flag in MatTranspose()
Add tests to MatTranspose_XXX to error if the nonzero pattern ch

Update handling of MatTranspose() with MAT_REUSE_MATRIX

Add error checking for the use of the MAT_REUSE_MATRIX flag in MatTranspose()
Add tests to MatTranspose_XXX to error if the nonzero pattern changes
Add support for MAT_REUSE_MATRIX with changing nonzero pattern for MatTranspose_SeqAIJ()
Remove use of updateAt in MatProductNumeric_AtB_SeqAIJ_SeqAIJ() since MatTranspose() automatically
skips unneeded new transpose
Add MatTransposeSymbolic()
Update to SLEPc that supports these changes

Commit-type: feature, error-checking, documentation
/spend 5h

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Merge branch 'barry/2022-06-24/linenumbers-petscstack' into 'main'

Fixes/improvements for PETSc stack handling

See merge request petsc/petsc!5368

Cleanup and unify naming of PetscCall routines

Commit-type: housekeeping
/spend 10m

Merge branch 'barry/2022-06-11/improve-mat-setable-values' into 'main'

Refactor handling of settable properties of matrix via MatSetOptions

See merge request petsc/petsc!5338

Refactor handling of setable properties of matrices via MatSetOptions()

Introduce PetscBool3 with enum values true, false, and unknown

Use PetscBool3 to store matrices properties in a matrix and cl

Refactor handling of setable properties of matrices via MatSetOptions()

Introduce PetscBool3 with enum values true, false, and unknown

Use PetscBool3 to store matrices properties in a matrix and cleanup interface to check these values

Add full support for symmetric, Hermitian, structurally symmetric, and SPD.

Commit-type: feature
/spend 6h

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Merge branch 'adams/mat-init-matops' into 'main'

Initialize MatOps_Values with two new NULLs

See merge request petsc/petsc!5382

Initialize MatOps_Values with two new NULLs

Merge branch 'barry/2022-06-13/make-one-line-if-call' into 'main'

Change if () { PetscCall() } three liner to one liner

See merge request petsc/petsc!5344

Change if () { PetscCall() } three liner and friends to one liners

for i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\

Change if () { PetscCall() } three liner and friends to one liners

for i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$[ ]*}\$?\1if (\2) PetscCall(\3$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; done

for i in `git ls-files | grep "\.[hc]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ }else]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$\([ ]*\)} \([- ._+=a-z0-9A-Z>*,()]*);\)\$?\1if (\2) PetscCall(\3$\4\5$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; done

Yes, really ugly but Barry still cannot master awk

Commit-type: housekeeping

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Merge branch 'stefanozampini/fix-function-composition' into 'main'

fix function composition

See merge request petsc/petsc!5274