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fbfcfee5
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| 19-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Remove the use and definition of __FUNCT__ throughout the code
Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-t
Remove the use and definition of __FUNCT__ throughout the code
Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-to: Andreas Mang <andreas@ices.utexas.edu>
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| #
c20ebc76
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| 22-Mar-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
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| #
992dc9be
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| 18-Mar-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-handle-func-failure
* master: (378 commits) SNES ex5: Fix coordinate determination for empty subdomains fixed petsc.bib entry p4est: fix syntax
Merge branch 'master' into knepley/feature-plex-handle-func-failure
* master: (378 commits) SNES ex5: Fix coordinate determination for empty subdomains fixed petsc.bib entry p4est: fix syntax error with error message SNES ex5: Correct Jacobian handling on patches SNES ex5: Stupid complex fixes DMP4est: fix transfer of labels to parents petsc4py: update to latest snapshot. Fixes da example breakage in petsc4py test suite Plex: Correct setting of options on refined or coarsened meshes Plex: Add info for grid hashing Plex: Add logging in interpolator creation Plex: Correct use of tabs in ASCII viewer DM: Shorten long event name Plex ex12: Create boundary label automatically at all levels of mesh hierarchy Plex ex12: Change PetscViewerSetFormat --> PetscViewerPushFormat - Fix order of SetMode and SetFilename Plex ex12: Change all functions to static Since DMDA with periodic boundary conditions does support P0 interpolation remove checks that error out under those conditions ascem-io.py and amanzi.py need to handle self.hdf5.include being None correctly fix MPI Uni to recycle communicators so it won't run out like with the petsc4py tests also fix check for location of python shared library on mac to check all cases each time Switch back to Sherry's version since she accepted by pull request PetscDraw: Update help messages for -draw_save* options ...
Conflicts: src/dm/impls/plex/plexfem.c
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| #
3afb9657
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| 16-Mar-2016 |
Dave May <dave.mayhem23@gmail.com> |
Merged petsc/petsc into master
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f55fe9e4
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| 14-Mar-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/fix-private-functions'
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af25d912
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| 06-Mar-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcgraph.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/imp
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcgraph.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/impls/bddc/bddcscalingbasic.c src/ksp/pc/impls/bddc/bddcschurs.c src/mat/impls/is/matis.c
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| #
e0877f53
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| 02-Mar-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
labeled a variety of additional internal functions as static to prevent them from being publically available in the library
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f37e7628
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| 21-Feb-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/add-pcfieldsplit-logevent
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| #
38318d23
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| 03-Feb-2016 |
Mark Adams <cal2princeton@yahoo.com> |
Merge branch 'tisaac/dmforest' of bitbucket.org:petsc/petsc into tisaac/dmforest
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| #
10725b64
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| 02-Feb-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into tisaac/dmforest
* master: (136 commits) Make error message specific to exactly what matrix is supported Prevent fblaslapack or f2cblaslapack from being compiled with t
Merge branch 'master' into tisaac/dmforest
* master: (136 commits) Make error message specific to exactly what matrix is supported Prevent fblaslapack or f2cblaslapack from being compiled with the -no-prec-dev Intel compiler option since it can produce incorrect results Fix for PCReset_HYPRE to make it reentrant. replace default superlu_dist '-mat_superlu_dist_colperm METIS_AT_PLUS_A' with MMD_ATA to avoid different random numbers for nightly tests fixes for merge from maint patch Added PCReset_HYPRE() so it may be used with SNESVI solvers remove Microsoft compiler message for paste macros used for handling Blas/Lapack macro name mangling for example Increase the number of PetscViewerPushFormat() possible to 25 and use a macro PETSCVIEWERFORMATPUSHESMAX for the value Configure: Remove redundant logging Bib: Added ref nightlybuids: fix permissions of script MatRegisterDestroy() does not exist but it is listed in manual pages externalpackages-git: save local changes if any - in git stash - before 'git checkout -f' Useful incase --with-package-commit=HEAD option was msissing [perhaps due to a typo] nightlybuilds: add xsdk builds Add architectures for testing xsdk package downloads (Trilinos, Hypre, SuperLU) create another version of TurnForward() for adaptive time stepping specifically Configure: Give proper default if HOME is missing from the environment fix abbreviation allow zeropivot for MatSOR_SeqAIJ_Inode, node size=1 add test case using adpative time stepping for checkpointing type 'NONE' ...
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| #
f44c6289
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| 28-Jan-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/add-pcreset-hypre-for-master
Needed to move PCDestroy_HYPRE() added to master to PCReset_HYPRE() since that was introduced as a bug fix for maint
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| #
c8e8b66f
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| 17-Jan-2016 |
BarryFSmith <bsmith@mcs.anl.gov> |
Merged in stefano_zampini/fix-aspin-create (pull request #371)
Hmm, got merged into master but my work flow has no good way of making sure it gets into maint when it should
SNESASPIN: destroy the n
Merged in stefano_zampini/fix-aspin-create (pull request #371)
Hmm, got merged into master but my work flow has no good way of making sure it gets into maint when it should
SNESASPIN: destroy the nonlinear preconditioner (specific to ASPIN) when ASPIN is destroyed
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| #
96a0c994
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| 14-Jan-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
fixed up formatting of references in manualpages to consistent style
References: + 1. - ref1 . 2. - ref2 - 3. - ref3
previously the formatting was varied and ugly
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| #
4f02bc6a
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| 14-Jan-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
broken nonlinear solver table links fixed
Reported-by: Andrew McRae <A.T.T.McRae@bath.ac.uk>
Also made References: formatting consistent by always listing authors first
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c3d89e0a
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| 19-Dec-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into hongzh/checkpointing
Manual merges for a couple of PetscOptions changes in master
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| #
b49bb413
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| 12-Dec-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into pr391/zianekhodja/lilia/tsirm/master
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| #
2a61db43
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| 08-Nov-2015 |
Toby Isaac <tisaac@uchicago.edu> |
Merge branch 'tisaac/dm-label-promote' into tisaac/dmforest
* tisaac/dm-label-promote: (319 commits) snes tutorial ex69: give mesh a name for regression purposes DM: make DMLabel labels a part o
Merge branch 'tisaac/dm-label-promote' into tisaac/dmforest
* tisaac/dm-label-promote: (319 commits) snes tutorial ex69: give mesh a name for regression purposes DM: make DMLabel labels a part of all DMs builder: update regression tests builder: update some missing package requirements DM: set coordinate vector name ts tutorials ex11_sa: make it compile mark variable as unused so compiler doesn't warn about unused value configure: use 'git cat-file -e' to check for existance of a commit in localrepo. ['git rev-parse' does not give error for a hash thats not in repo] petsc4py: revert to manually syncing petsc4py with petsc master changes configure: revert gitcommit default value to Null. If a pacakge using giturl does not change this value - raise an error fix: revert change in a44bcdf that breaks with pgf90 update test output for fixed to hypre interface that now actually pass the interp vectors to BoomerAMG Error message should say use negative threshold value to prevent filtering out zeros Calls to HYPRE_BoomerAMGSetInterpVectors() did not actually copy the vector data pointer from the PETSc vector to the hypre vector thus resulting in the hypre interp vectors being identically zero and hence not affecting the quality of the AMG hierarchy produced/ DMPlex: Silence overzealous compiler warnings add row/col orientation to MatConvert_Elemental_Dense fix formatting error in previous commit [broke nightlybuilds] fix formating of TSTHETA manual page and add missing command line option run hwloc with MPIEXEC and binding so it runs on the correct machine fix: memory leaks [in valgrind test] ...
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| #
9bc1b9be
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| 03-Nov-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry-allow-vecset-nan-3.6
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| #
c7878088
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| 03-Nov-2015 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'stefano_zampini/feature-pardiso-schur' of https://bitbucket.org/petsc/petsc into stefano_zampini/feature-pardiso-schur
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| #
1b120e71
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| 29-Oct-2015 |
Fande Kong <fdkong.jd@gmail.com> |
Merge remote-tracking branch 'petsc/master' into fix-pcgasm-reuse
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| #
c384bc4d
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| 27-Oct-2015 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/fix-examples-plex
* master: (112 commits) correct expression for implict ODE/DAE in table 11 of users manual remove warning about deprecated MPI call in exampl
Merge branch 'master' into knepley/fix-examples-plex
* master: (112 commits) correct expression for implict ODE/DAE in table 11 of users manual remove warning about deprecated MPI call in examples rm variables declared in middle of subroutine tolerance for equality in PETSc test should depend on machine epsilon tolerance for acccuracy in test example should depend on machine epsilon increase convergence tolerance to get same result in single precision as double for convergence history update no change output for gasm test which had not been properly updated remove C++ // comment example mistakenly used MPI_COMM_WORLD as if it was rank in print statement thus producing output only with MPI Uni grep out name of DM object since on some systems the address printed has extra zeros thus producing a false difference in output increase tolerance for test example build: revert el6-4 build to cg - as el6 compilers give link errors fix error type insure similar convergence history for single, double, quad fix ex104.c based on Barry's suggestion increase example convergence tolerance to get matching convergence history in single and double precision increase convergence tolerance so that test example has similar convergence history in single and double precisions changed from cg to gmres for eigenestimator since in single precision cg produced a possible indefinite matrix report change test example tolerance to depend on machine epsilon so as to give correct results in various precisions loosen convergence tolerance to have similar convergence history with single, double, quad precisions ...
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| #
bbd98b0d
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| 26-Oct-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into shri/add-tsevent-to-powergrid-examples
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| #
a6bd58b0
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| 26-Oct-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into stefano_zampini/feature-pardiso-schur
Branch got out of sync with master
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| #
1992313a
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| 26-Oct-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'stefano_zampini/fix-aspin-create'
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| #
1ceb14c0
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| 23-Oct-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into pr263/PierreBdR/ts-domain-error-in-stage/master
|