| #
603303d3
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| 12-Jul-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/fix-fe-default
* master: (297 commits) Bib: Added refs and fixed one Doc: Fixed formatting problems for MatCreateAIJ() manual page. Add to PCSOR manual page
Merge branch 'master' into knepley/fix-fe-default
* master: (297 commits) Bib: Added refs and fixed one Doc: Fixed formatting problems for MatCreateAIJ() manual page. Add to PCSOR manual page information about convergence testing when using KSPRICHARDSON SNES ex5: Restore old output since this breaks an example I have Noted that some Cray XC systems will use 'aprun' instead of 'srun'. Thanks to Herr Doktor Hong Zhang for this suggestion. Added example configure script for Cray XC40 with KNL processors (e.g., NERSC Cori). Fix possible sprintf -Wformat-overflow PetscMalloc2-7: fix -Wint-in-bool-context for GCC 7 SNES ex5: make boundary condition handling consistent for symmetry SNES ex5: use L2 norm and *_monitor_short for output SNES ex5: the L^2 norm scales with the l^2 norm over sqrt(N) SNES ex5: refactor MMS capability to avoid extreme code duplication Documentation fix: typo in PetscLogStageRegister manual page. nodes -> vertices rename DMNetworkGetComponentTypeOffset -> DMNetworkGetComponentKeyOffset rename DMNetworkGetConnectedNodes() -> DMNetworkGetConnectedVertices() Jacobians for adjoints for explicit methods and constant Jacobians never got initialized fix complex build error fix build failure with fortran interface fix compile error with cdc753b64c658d532d7813e942002e67025667a6 ...
Conflicts: src/snes/examples/tutorials/ex13.c src/snes/examples/tutorials/ex62.c src/snes/examples/tutorials/ex69.c
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| #
561bb3f4
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| 30-Jun-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-rigid-bodies
* master: (204 commits) windows fixes revert this change as a relavent fix is already in origin/knepley/fix-ex-types regenerate output l
Merge branch 'master' into knepley/feature-rigid-bodies
* master: (204 commits) windows fixes revert this change as a relavent fix is already in origin/knepley/fix-ex-types regenerate output log for snes_tutorials-ex62_fetidp_3d_tet that got corrupted in 188e10d6f1cffa866ec0197053a0e55fa4e7da41 fix opensolaris build error with --with-log=0 Undefined first referenced symbol in file PetscLogEventGetPerfInfo arch-opensolaris-misc/tests/src/dm/impls/plex/examples/tests/ex9.o fix warnings on windows C:\cygwin64\home\petsc\PETSC~1.CLO\src\tao\examples\TUTORI~1\ex1.c(217): warning C4113: 'void (__cdecl *)()' differs in parameter lists from 'void (__cdecl *)(void)' disable example with absoft (due to fixed/free form limit) c89 fixes metis: setself.downloaddirnames for change in 6d90219d8fa4f8b2fd242cc6ff9008358d87c26f Plex ex19: Remove unneeded code Plex: Fix projection when we have a dmAux which is a domain boundary - If we are projecting on a lower dimension thing (effectiveHeight > 0), then we need to get the space and dual space on this subcell - The tabulation needs to be in the right dimension for both dm and dmAux PetscFE: Added height subspaces to PetscFE - Added PetscFEGetHeightSubspace() - Added array in struct PetscDualSpace: Small cleanup of parameter name PetscSpace: Added height subspaces for PetscSpace - Added PetscSapceGetHeightSubspace() and member function - Added subspaces array fix compile warning: /sandbox/petsc/petsc.clone/src/snes/examples/tests/ex2.c:250:8: warning: ‘pointsAllProcs’ may be used uninitialized in this function [-Wmaybe-uninitialized] ierr = DMInterpolationSetUp(interpolator, dm, pointsAllProcs);CHKERRQ(ierr); migrate 'build requires: !mpiuni' to new format migrate 'build requires: !complex' to new format workarround 'division by zero' compiler warning on windows C:\cygwin64\home\petsc\PETSC~3.CLO\src\ts\examples\TUTORI~1\ex11.c(416): warning #39: division by zero if (uL->h < 0 || uR->h < 0) {for (i=0; i<1+dim; i++) flux[i] = 0./0.; return;} /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Reconstructed thickness is negative"); */ dos2unix to prevent warnings on opensolaris "/export/home/petsc/petsc.clone/src/ksp/ksp/examples/tests/ex53.c", line 6: warning: invalid white space character in directive fix some minor style issues Extend AMS/ADS to support high-order element. ...
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| #
dd169d64
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| 28-Jun-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-gmsh-periodic
* master: (1016 commits) metis: setself.downloaddirnames for change in 6d90219d8fa4f8b2fd242cc6ff9008358d87c26f fix compile warni
Merge branch 'master' into stefano_zampini/feature-gmsh-periodic
* master: (1016 commits) metis: setself.downloaddirnames for change in 6d90219d8fa4f8b2fd242cc6ff9008358d87c26f fix compile warning: /sandbox/petsc/petsc.clone/src/snes/examples/tests/ex2.c:250:8: warning: ‘pointsAllProcs’ may be used uninitialized in this function [-Wmaybe-uninitialized] ierr = DMInterpolationSetUp(interpolator, dm, pointsAllProcs);CHKERRQ(ierr); migrate 'build requires: !mpiuni' to new format migrate 'build requires: !complex' to new format workarround 'division by zero' compiler warning on windows C:\cygwin64\home\petsc\PETSC~3.CLO\src\ts\examples\TUTORI~1\ex11.c(416): warning #39: division by zero if (uL->h < 0 || uR->h < 0) {for (i=0; i<1+dim; i++) flux[i] = 0./0.; return;} /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Reconstructed thickness is negative"); */ dos2unix to prevent warnings on opensolaris "/export/home/petsc/petsc.clone/src/ksp/ksp/examples/tests/ex53.c", line 6: warning: invalid white space character in directive fix output file - corresponding to code changes in efd4aadf157bf1ba2d80c2be092fcf4247860003 disable test on windows update log from opensolaris so that the diff is clean on linux aswell update grep in sync with change in efd4aadf157bf1ba2d80c2be092fcf4247860003 Fixed code that did not correctly set current color for block insertion Update output files that did not get fixed after previous merges Change MPIUni to not immediately abort on operations it cannot perform, instead return error code Add filter for example that can produce 1 different iteration count Example add system calloc, bad formating of %d in print, commented out code Always use (void) for functions that take no arguments, never () always need to caste PetscReal variables to (double) in print statements updates to manual page for clarity update help menu for MatRARt() -- MatRARt_mpiaij_mpiaij is supported now, but not efficient. fix nightlybuild error with c1cbb1def3f8ddca04c3998b9c06618fd1ffef35 on arch-linux-IPL64 src/ksp/pc/examples/tests ex5_1 ...
Conflicts: include/petscdm.h src/dm/impls/plex/plexcreate.c src/dm/impls/plex/plexgmsh.c src/dm/impls/plex/plexhdf5.c
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| #
c41d012e
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| 27-Jun-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-dm-bc-components
* master: (320 commits) fix compile warning: /sandbox/petsc/petsc.clone/src/snes/examples/tests/ex2.c:250:8: warning: ‘pointsAllProcs’ m
Merge branch 'master' into knepley/feature-dm-bc-components
* master: (320 commits) fix compile warning: /sandbox/petsc/petsc.clone/src/snes/examples/tests/ex2.c:250:8: warning: ‘pointsAllProcs’ may be used uninitialized in this function [-Wmaybe-uninitialized] ierr = DMInterpolationSetUp(interpolator, dm, pointsAllProcs);CHKERRQ(ierr); migrate 'build requires: !mpiuni' to new format migrate 'build requires: !complex' to new format workarround 'division by zero' compiler warning on windows C:\cygwin64\home\petsc\PETSC~3.CLO\src\ts\examples\TUTORI~1\ex11.c(416): warning #39: division by zero if (uL->h < 0 || uR->h < 0) {for (i=0; i<1+dim; i++) flux[i] = 0./0.; return;} /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Reconstructed thickness is negative"); */ dos2unix to prevent warnings on opensolaris "/export/home/petsc/petsc.clone/src/ksp/ksp/examples/tests/ex53.c", line 6: warning: invalid white space character in directive fix output file - corresponding to code changes in efd4aadf157bf1ba2d80c2be092fcf4247860003 disable test on windows update log from opensolaris so that the diff is clean on linux aswell update grep in sync with change in efd4aadf157bf1ba2d80c2be092fcf4247860003 Fixed code that did not correctly set current color for block insertion Update output files that did not get fixed after previous merges Change MPIUni to not immediately abort on operations it cannot perform, instead return error code Add filter for example that can produce 1 different iteration count Example add system calloc, bad formating of %d in print, commented out code Always use (void) for functions that take no arguments, never () always need to caste PetscReal variables to (double) in print statements updates to manual page for clarity update help menu for MatRARt() -- MatRARt_mpiaij_mpiaij is supported now, but not efficient. fix nightlybuild error with c1cbb1def3f8ddca04c3998b9c06618fd1ffef35 on arch-linux-IPL64 src/ksp/pc/examples/tests ex5_1 output has changed with e6d0a238963c2a97dd04845ea512b529992c7cdb so update the output file ...
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| #
78cf9a39
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| 25-Jun-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/barry/consistent-formating-ascii-solver-viewers'
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| #
efd4aadf
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| 30-Apr-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
Make ASCII PC/KSP/SNES/TSView() code and output in a standard style
The code that prints the ASCII view for solvers was occasionally inconsistent: 1) TSView printed the type specific information aft
Make ASCII PC/KSP/SNES/TSView() code and output in a standard style
The code that prints the ASCII view for solvers was occasionally inconsistent: 1) TSView printed the type specific information after the general info while all other solvers printed it before (right after the name of the type is printed) 2) KSPView consistently printed the name of the subtype on EACH line of the subtypes output as did a few of the PC and SNES viewers. Since they are all printed indented directly below the subtype name there is no reason to print this information on each line 3) TSView printed output about number of linear solvers and SNES even for explicit methods, which is goofy. 4) a few other minor formatting and consistency issues where fix.
Commit-type: style-fix, feature Time: 16 hours
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| #
ec14d8c8
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| 27-May-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-sphere-mesh
* master: (2633 commits) Bib: Added ref SNES ex56: Update test output add a citation to petsc.bib Plex: Initialize variables ini
Merge branch 'master' into knepley/feature-plex-sphere-mesh
* master: (2633 commits) Bib: Added ref SNES ex56: Update test output add a citation to petsc.bib Plex: Initialize variables initialize ap as complained by the nightly tests Plex ex3: Update to new point function API initialize some variables as complained by nightly tests SNES ex12: Mix misnaming Nf --> Nc update tests add tests add MatView_SeqXAIJ_ASCII_structonly(); enable A->structure_only in MatSetValuesBlocked_SeqBAIJ typo fill-in some references Bib: Fixed ref Plex: Added PLY to file support Plex: Adding PLY support PetscDS: Turn off Fortran bindings for Constants Plex tests: Updated to new point function API SNES ex56: Moved tests to new format DM: Allow field projection functions to take an array of scalars - This will allow us to pass in user data to kernels without void *, more efficiency than aux fields ...
Conflicts: config/builder.py include/petscdmplex.h src/dm/impls/plex/examples/tests/ex1.c src/dm/impls/plex/plexcreate.c src/dm/impls/plex/plexgmsh.c src/snes/examples/tutorials/ex63.c
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| #
852f401d
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| 24-Apr-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-torus
* master: (174 commits) Bib: Another ref Increase patchlevel to 3.7.6 Explicitly listing the LTO library causes difficulties on MacOS so a
Merge branch 'master' into knepley/feature-plex-torus
* master: (174 commits) Bib: Another ref Increase patchlevel to 3.7.6 Explicitly listing the LTO library causes difficulties on MacOS so avoid it TSBDF: Update changes/dev.html Added Fortran TaoType and TaoLineSearchType definitions Add Fortran TaoType and TaoLineSearchType definitions setblocksize for iscol_sub TSBDF: Use standard TS API and options to control adaptivity Bib: More refs and a correction SNESTest: Bug-fix in SNESTest when threshold printing option is turned on. fix warning and valgrind complains reported by the nightly tests Section+Doc: Small doc fix pflotran: switch to using the new upstream git repo DMPlex: Error if attempt to partition a distributed graph with Chaco fix complex build error fix complex build PetscError() did not properly copy over the specific error message when error type was PETSC_ERROR_INITIAL TSAdapt: Refactor handling of the always_accept flag Additional clarification for MatMeshToCellGraph() manual page optimize MatCreateSubMatrix_MPIAIJ() by merging check of sameXXXDist() into one MPI_AllReduce ...
Conflicts: config/BuildSystem/config/packages/med.py
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| #
8bee6947
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| 30-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (108 commits) Bib: Added ref Bib: Updated reference Bib: Updated reference Work around problems with Apple Xcode 8.3 and h
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (108 commits) Bib: Added ref Bib: Updated reference Bib: Updated reference Work around problems with Apple Xcode 8.3 and handling of rpath argument with gfortran help menu update for MatCreateSubMatrices() Reported-by: Brad Aagaard <baagaard@usgs.gov> fix flops for PCApply_PBJacobi_1 and PCApply_PBJacobi_7 Reported-by: Pierre Jolivet <pierre.jolivet@enseeiht.fr> TSRK: Fix FSAL optimization to not skip update and check or stages. Travis-CI: Workaround too long TMPDIR in macOS with Open MPI test: Fix type mismatch in KSP test. test: Fix warnings from gfortran -Wconversion (OS X, Homebrew build) MPIUNI: Silence GCC -Wconversion warnings Fortran: Add error checking for incorrect PETSC_NULL_XXX argument when expecting function fix test output per changes in 517c9301b2e9239931bfd644803fd6bb859387ea MUMPS: update to version 5.1.1 with opensolaris compile fixes TSRK: Mention 5BS in the changelog. TSRK: Mention the new 5BS scheme in the manual. fix 'unused variable' warning Remove unused code added hbw_realloc fixed undefined ptr ...
Conflicts: config/BuildSystem/config/packages/med.py
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| #
3e98d00b
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| 17-Mar-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/balay/fix-redundant-decls-warnings-master'
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c90b701e
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| 14-Mar-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-pragmatic-parallel
* master: (1379 commits) Minor fixes for tchem examples due to changes in PETSc infrastructure update webpage about API changes
Merge branch 'master' into knepley/feature-plex-pragmatic-parallel
* master: (1379 commits) Minor fixes for tchem examples due to changes in PETSc infrastructure update webpage about API changes add help menu for MatCreateSubMatricesMPI() rename struct Mat_SubMat -> Mat_SubSppt add a little information to the manual about using tchem rename MatCreateSubMatrixComposite -> MatCreateSubMatrixVirtual; Mat_SubMatrix -> Mat_SubVirtual need to protect the \ passed on the makefile on my Mac Bib: Updated ref update src/mat/examples/tests/output/ex23_#.out rename MatGetSubMat -> MatCreateSubMat Mark MatCreateMPIAIJWithSplitArrays() and MatMPIAIJSetPreallocationCSR() with MAT_NO_OFF_PROC_ENTRIES superlu: libray is installed in PREFIX/lib64 - fix this to use PREFIX/lib backport fixes cc105cc3 2b35c90a - required for 3bf428d - that was backported from master - 80c96bb 'echo -n' fails on opensolaris/osx - so avoid using it. fix diffs in nightlybuilds due to options in ~/.petscrc add Kelley03 to src/docs/tex/petsc.bib build: determine moudles, mpi.h used during buildtime and print in 'info' fix analyzer warnings fix build failure on opensolaris - where -lm from flibs is removed due to -lm in cxxlibs. But then - only flib gets used for some configure tests [blaslapack, parms] config: prefer __restrict over C99 restrict keyword ...
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| #
72f1dcff
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| 13-Mar-2017 |
Satish Balay <balay@mcs.anl.gov> |
fix duplicate definitions warned by -Wredundant-decls
Also a bugfix? BLASdotu_ -> dotu
Reported-by: Till Martens <till.martens@dlr.de>
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9137bce6
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| 24-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/remove-funct'
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fbfcfee5
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| 19-Dec-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Remove the use and definition of __FUNCT__ throughout the code
Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-t
Remove the use and definition of __FUNCT__ throughout the code
Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc Time: 1.5 hours Thanks-to: Andreas Mang <andreas@ices.utexas.edu>
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| #
10c1f87b
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| 27-Oct-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Merge branch 'master' into tisaac/dmplex-feature-real-to-ref
I need updated PetscFE interfaces in what I'm going to do
* master: (603 commits) parmetis: fix typo in testsuite Added PETSC_HAVE_A
Merge branch 'master' into tisaac/dmplex-feature-real-to-ref
I need updated PetscFE interfaces in what I'm going to do
* master: (603 commits) parmetis: fix typo in testsuite Added PETSC_HAVE_ATTRIBUTEALIGNED flag to makefile PCSetUp_SVD() used incorrect matrix for matrix size in parallel, also need to skip LAPACK call if matrix size is zero strumpack: update to latest version 1.0.4 Remove valgrind warning about MPI_Allreduce() with uninitialized data sed for test output that has atol convergence with quad precision updated ex1_nest tests fixed incorrect key value fix: bad merge a69d34a test: move runex78 to TESTEXAMPLES_C_NOTSINGLE build: fix warnings sys: update test to produce same result - irrespective of debug/opt build - and presence of ~/.petscrc sys: src/sys/examples/tests/ex30.c -> src/sys/examples/tests/ex32.c to avoid conflict in master Sed output, since quad precision reduces below atol on these tests remove automatically generated matrix names from test output files since can be different Fixes for MatMPIXXXSetPreallocation(), they were not reentrant, since they kept the information used for matrix-vector products GAMG: fix PCView_GAMG() format - and update output/ex56_0.out superlu_dist: 64-bit-indices fix https://github.com/xiaoyeli/superlu_dist/issues/4 Add SNESSetDivergenceTolerance / -snes_divergence_tolerance. fixed unit read in Plex ...
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| #
e923053f
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| 15-Oct-2016 |
stefano_zampini <stefano.zampini@gmail.com> |
Merge branch 'stefano_zampini/feature-convert-matnest-matis' into stefano_zampini/feature-pcbddc-saddlepoint
I have to merge it here, since there's an API addition for MatIS in stefano_zampini/featu
Merge branch 'stefano_zampini/feature-convert-matnest-matis' into stefano_zampini/feature-pcbddc-saddlepoint
I have to merge it here, since there's an API addition for MatIS in stefano_zampini/feature-pcbddc-saddlepoint that prevents me to smoothly merge stefano_zampini/feature-convert-matnest-matis into next.
This will also facilitate merging stefano_zampini/feature-pcbddc-saddlepoint into master
Conflicts: src/docs/website/documentation/changes/dev.html
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| #
8d6709d6
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| 22-Aug-2016 |
Toby Isaac <tisaac@uchicago.edu> |
Merge branch 'tisaac/sys-fix-realloc' into tisaac/petscfe-matching-quadrature-order
* tisaac/sys-fix-realloc: (71 commits) Sys: fix PetscTrReallocDefault() and PetscReallocAlign() clearify when
Merge branch 'tisaac/sys-fix-realloc' into tisaac/petscfe-matching-quadrature-order
* tisaac/sys-fix-realloc: (71 commits) Sys: fix PetscTrReallocDefault() and PetscReallocAlign() clearify when MatMkl_CPardisoSetCntl() can be used in the manual pages Fixed manual page for -snes_anderson_beta Update zfftf.c remove Hermitian information from output since it is only produced in complex case and thus produces different test output fixes for 64 bit integers in test example, fix uninitialized variable in test example tests: move runex49 to TESTEXAMPLES_C_NOTSINGLE add a PCView_SVD to show parameters -petscpartitioner_type simple was not being picked up by options thus generating test error missing CHKERRQ(ierr) on PetscPrintf() statements in newly added test example PetscViewerVTK: Move DM reference increment into the VTK viewer and out of the DM implementation, as suggested by Jed Brown missing crosslinks between manual pages Updated 3.7 release notes to clearly indicate how to update usage of KSP/SNES/TS/SetMonitor(xxx,XXXMonitorDefault,NULL,NULL); Fix for commit b6480e041dd2293a65f96222772d68cdb4ed6306 that broke this example Example of factorization of a singular matrix may actually work due to round off removed unused variables matshell: clean up and add some new MATOPs to Fortran. Remove unneeded checks for use of the compressed row for diagonal block of matrices in GAMG ptscotch: update to version 6.0.4 ptscotch: fix buggy pthread detection code on Mac/Linux ...
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| #
35f895b4
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| 22-Aug-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Fixed manual page for -snes_anderson_beta
Fix code formatting error and missing ierr =
Time: .1 hours Reported-by: Jonas Mairhofer <mhofer@itt.uni-stuttgart.de>
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| #
54761ea3
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| 14-Aug-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/fix-successful-numerical-factorization-after-failure/master
The maint patch for the given problem cannot merge cleanly into next due to changes in the same code in m
Merge branch 'master' into barry/fix-successful-numerical-factorization-after-failure/master
The maint patch for the given problem cannot merge cleanly into next due to changes in the same code in master (the introduction of MatFactorGetError()) therefor need to merge in master and use the new construct before merging to next
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| #
3d996552
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| 19-Jul-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/docs/website/documentation/changes/dev.html src/ksp/ksp/examples/tutorials/ex59.c src/ksp/pc/impls/bddc/bddc.c
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/docs/website/documentation/changes/dev.html src/ksp/ksp/examples/tutorials/ex59.c src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcfetidp.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/impls/bddc/bddcschurs.c src/mat/impls/is/matis.c src/mat/impls/is/matis.h
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| #
6d075ad4
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| 25-Jun-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'pr495/mapdes/snes-compute-final-residual-flag/master'
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4fc747ea
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| 15-Jun-2016 |
Lawrence Mitchell <lawrence.mitchell@imperial.ac.uk> |
SNES: Add flag indicating if final residual is always computed
Although SNESSolve_XXX always updates the solution variable, it may not be the case that the residual in vec_func is the residual at th
SNES: Add flag indicating if final residual is always computed
Although SNESSolve_XXX always updates the solution variable, it may not be the case that the residual in vec_func is the residual at the new solution. Track this behaviour explicitly for all concrete implementations. We will use this in SNESSolve_FAS to determine if the residual must be computed before transferring it between levels.
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| #
9884e7e0
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| 25-May-2016 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into tisaac/ts-ex11-amr
* master: (141 commits) chombo: fix dirname in tarball and update to use snapshot with gcc-6.1 compile fix petsc4py: fix tarball url [for arbitary c
Merge branch 'master' into tisaac/ts-ex11-amr
* master: (141 commits) chombo: fix dirname in tarball and update to use snapshot with gcc-6.1 compile fix petsc4py: fix tarball url [for arbitary commitid] - and dirname in tarball Plex: Moved ReconstructGradients_Internal() and ApplyLimiter_Internal() to Plex from SNES CUDA: Added external declaration for cuBLAS handle. docs: fix reference to KSP_Create in parent commit Add information on PETSC_EXTERN and PETSC_INTERN to developers manual Plex: Symbol is shared between DM and SNES, so must be EXTERN Plex: Remove unused variables Configure: Fix check for spaces in PETSC_DIR Plex: Updated examples to new DMPlexCreateBoxMesh() sick of failure due to incorrect master branch SNES ex12: Fixed unstructured GMG test SNES ex12: Added another unstructured GMG test petsc4py: use the snapshot with the fix for dmplex change Examples that require Fortran to compile but were listed in tests that did not require Fortran Plex ex19: Added DMSetFromOptions() Plex: Store a flag indicating whether the boundary should change during remeshing - Set using -dm_plex_remesh_bd - Changed Remesh_Internal() signature Always coarsen boundaries. Plex: Fixed option name Plex: Protect unused variables ...
Conflicts: src/dm/impls/plex/makefile src/snes/utils/dmplexsnes.c
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| #
bef83e63
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| 23-May-2016 |
Stefano Zampini <stefano.zampini@gmail.com> |
Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint
Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcprivate.c src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
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| #
53efadd4
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| 21-May-2016 |
Barry Smith <bsmith@mcs.anl.gov> |
use of unitialized and badly named variable in SNESSetFromOptions_Anderson()
Reported-by: nightly test
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