| #
8383d7d7
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| 23-Jan-2019 |
Fande Kong <fdkong.jd@gmail.com> |
Added API: SNESGetCheckJacobianDomainError
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| #
b351a90b
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| 23-Jan-2019 |
Fande Kong <fdkong.jd@gmail.com> |
Add one petsc option: -snes_check_jacobian_domain_error
By default, we check Jacobian domain error after each Jacobian evaluaction in the debug mode, but
we do not check it in the optimized mode. T
Add one petsc option: -snes_check_jacobian_domain_error
By default, we check Jacobian domain error after each Jacobian evaluaction in the debug mode, but
we do not check it in the optimized mode. This option is used to turn the checker on/off.
show more ...
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| #
ddad275a
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| 21-Jan-2019 |
Patrick Farrell <patrick@pefarrell.org> |
Merge branch 'master' into knepley/feature-snes-patch
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| #
cc6b0f04
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| 18-Jan-2019 |
Fande Kong <fdkong.jd@gmail.com> |
Added a few tests for Jacobian domain errors
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| #
07b62357
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| 18-Jan-2019 |
Fande Kong <fdkong.jd@gmail.com> |
Support domain errors in SNESComputeJacobian
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| #
cd612eed
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| 17-Jan-2019 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'Fande-Kong/feature-retrieve-sol-and-step-norms-snes' [PR #1321]
* Fande-Kong/feature-retrieve-sol-and-step-norms-snes:
Add two APIs: SNESGetUpdateNorm and SNESGetSolutionNorm
Retrieve
Merge branch 'Fande-Kong/feature-retrieve-sol-and-step-norms-snes' [PR #1321]
* Fande-Kong/feature-retrieve-sol-and-step-norms-snes:
Add two APIs: SNESGetUpdateNorm and SNESGetSolutionNorm
Retrieve update and solution norms
show more ...
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| #
df4be7ee
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| 16-Jan-2019 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-multiple-ds
* master: (156 commits)
Added missing CHKERRQ()
KSP ex56: Added alt output file for ex56_2.
Revert "KSP ex56: Updated test output and dom
Merge branch 'master' into knepley/feature-multiple-ds
* master: (156 commits)
Added missing CHKERRQ()
KSP ex56: Added alt output file for ex56_2.
Revert "KSP ex56: Updated test output and domain size for test _2."
DMStag tutorial ex4: fix stencil errors
Hierarchical partitioner: added an alt output file
Add support for DMGetMatrix() with periodic boundary conditions in one dimension for DMDA.
Fixed incorrect 'ntext' argument in PetscOptionsEList call in SNES ex12.c
ISCreateSubIS: Initialize variables owner and lidx to avoid compiler warnings
metis: provide -download-metis-use-doubleprecision option
KSP ex56: Updated test output and domain size for test _2.
Hierarchical partitioner: add a bit documentation
ISCreateSubIS: Added checkers for parameters
Added a test for hierarchical partitioning vertex weights
Plex+Doc: Document options for DMPlexCreateBoxMesh()
Hierarchical partitioner supports vertex weights
Create an API ISCreateSubIS that extracts
Add an alt output file
Plex: Can now give bounds to DMPlexCreateBoxMesh() from options - Use -dm_plex_box_lower and dm_plex_box_upper
PCMG: These methods should be optional
PCMG: Make PCMGGet/SetLevels() proper member functions - Also need to compose them in GAMG
...
Conflicts:
src/dm/impls/plex/plexsection.c
show more ...
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| #
4591eaf2
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| 15-Jan-2019 |
Fande Kong <fdkong.jd@gmail.com> |
SNESGetSolutionNorm: Fixed ftn-auto
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| #
c1e67a49
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| 15-Jan-2019 |
Fande Kong <fdkong.jd@gmail.com> |
Add two APIs: SNESGetUpdateNorm and SNESGetSolutionNorm
Retrieve update and solution norms
We may/might want to print update and solution norms in a user-provided convergence checker if the SNES co
Add two APIs: SNESGetUpdateNorm and SNESGetSolutionNorm
Retrieve update and solution norms
We may/might want to print update and solution norms in a user-provided convergence checker if the SNES converged due to a small update length.
show more ...
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| #
6766dcbc
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| 11-Jan-2019 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/pr1206/arcowie-rem/feature-error-logging/master'
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| #
2c2595ff
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| 20-Dec-2018 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/fix-plex-partition-parallel
* master: (414 commits)
very small updates to users manual
syntax is define(XXX) in examples tests not defined(XXX)
Increase patc
Merge branch 'master' into knepley/fix-plex-partition-parallel
* master: (414 commits)
very small updates to users manual
syntax is define(XXX) in examples tests not defined(XXX)
Increase patchlevel to 3.10.3
petsc4py: updat to latest maint snapshot with SNESTEST updates
Fix link for CUDA example in PETSc from GPUs.html page Minor fixes to installation instructions
Mat: Fixed types in Pardiso interface
Converted example comment to latex
This example crashes (for unknown reasons, probably related to the handling of extended derived types passed as arguments) with the PGI Fortran compiler
Remove outdated requires: from top of several examples
remove outdated test requires: command from top of source file
Fix the documentation for -ksp_gmres_cgs_refinement_type
Commit f20c2d659b168217cb455989f28afe052d71a64c broke lex.py so the users manual was no longer being built. There reverted the changes to lex.py
Plex: Add PetscPartitioner to fort list Suggested-by: Jiaoyan Li <Jiaoyan.Li@inl.gov>
Doc: Fix spelling Suggested-by: Manuel Colera Rico <m.colera@upm.es>
Mat ex88: check in double or quad precision only
Fix error with PetscComplex when PETSc is compiled with C and used in C++
configure: fix typo endwith -> endswith
Sys ex23: Migrated to ts_max_time in yaml file as well.
AO ex5: Fixed missing CHKERRQ();
Mat test ex88: add tests for MatMultAdd and MatMultTranposeAdd
...
Conflicts:
src/dm/impls/plex/examples/tests/ex12.c
show more ...
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| #
bfdd6862
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| 13-Dec-2018 |
Patrick Farrell <patrick@pefarrell.org> |
Small fixes
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| #
db78201b
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| 12-Dec-2018 |
Patrick Farrell <patrick@pefarrell.org> |
Two small changes for ease of breaking in gdb
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| #
34d8b122
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| 09-Dec-2018 |
Patrick Farrell <patrick@pefarrell.org> |
Merge branch 'master' into knepley/feature-snes-patch
Not sure if this has done the right thing because there are no tests
yet. Also, the fortran stubs break (it doesn't know what to do with
SNESCo
Merge branch 'master' into knepley/feature-snes-patch
Not sure if this has done the right thing because there are no tests
yet. Also, the fortran stubs break (it doesn't know what to do with
SNESCompositeType), and I don't know how to fix it.
show more ...
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| #
f35fe2a5
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| 06-Dec-2018 |
Joseph Pusztay <josephpu@buffalo.edu> |
Merged petsc/petsc into master
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| #
83c10b7e
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| 04-Dec-2018 |
Pierre Jolivet <pierre.jolivet@enseeiht.fr> |
Merged petsc/petsc into master
|
| #
cf90aa19
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| 03-Dec-2018 |
Barry Smith <bsmith@mcs.anl.gov> |
NULL_XXX in Fortran is actually PETSC_NULL_XXX
Commit-type: feature, documentation
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| #
1ab378fc
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| 22-Nov-2018 |
Vaclav Hapla <vaclav.hapla@erdw.ethz.ch> |
Merge branch 'master' into haplav/feature-mataij-load-from-hdf5
because I need the test loop fix
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| #
b458f822
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| 22-Nov-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'Fande-Kong/fix_complete_print_option' into maint [PR #1239]
* Fande-Kong/fix_complete_print_option:
Fixed "-snes_test_jacobian_view"
"-snes_test_jacobian_view" did not show differences
Merge branch 'Fande-Kong/fix_complete_print_option' into maint [PR #1239]
* Fande-Kong/fix_complete_print_option:
Fixed "-snes_test_jacobian_view"
"-snes_test_jacobian_view" did not show differences between hand-coded and finite difference Jacobians as it claims
show more ...
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| #
9fd257b7
|
| 22-Nov-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'Fande-Kong/fix_complete_print_option' [PR #1239]
* Fande-Kong/fix_complete_print_option:
Fixed "-snes_test_jacobian_view"
"-snes_test_jacobian_view" did not show differences between ha
Merge branch 'Fande-Kong/fix_complete_print_option' [PR #1239]
* Fande-Kong/fix_complete_print_option:
Fixed "-snes_test_jacobian_view"
"-snes_test_jacobian_view" did not show differences between hand-coded and finite difference Jacobians as it claims
show more ...
|
| #
a0c90127
|
| 19-Nov-2018 |
Fande Kong <fdkong.jd@gmail.com> |
Destroy mviewer if it was created in SNESTestJacobian
Otherwise we will have something like
[ 1]32 bytes PetscFunctionListAdd_Private() line 246 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-
Destroy mviewer if it was created in SNESTestJacobian
Otherwise we will have something like
[ 1]32 bytes PetscFunctionListAdd_Private() line 246 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-opt/PR-1239/src/sys/dll/reg.c
[ 1]32 bytes PetscStrallocpy() line 192 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-opt/PR-1239/src/sys/utils/str.c
[ 1]32 bytes PetscFunctionListAdd_Private() line 213 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-opt/PR-1239/src/sys/dll/reg.c
[ 1]96 bytes PetscViewerCreate_ASCII() line 852 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-opt/PR-1239/src/sys/classes/viewer/impls/ascii/filev.c
[ 1]16 bytes PetscStrallocpy() line 192 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-opt/PR-1239/src/sys/utils/str.c
[ 1]752 bytes PetscViewerCreate() line 396 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-opt/PR-1239/src/sys/classes/viewer/interface/viewreg.c
[ 1]16 bytes PetscCommDuplicate() line 143 in /home/petsc/jenkins/arch-jenkins-linux-gcc-pkgs-opt/PR-1239/src/sys/objects/tagm.c
show more ...
|
| #
df10fb39
|
| 19-Nov-2018 |
Fande Kong <fdkong.jd@gmail.com> |
Fixed "-snes_test_jacobian_view"
"-snes_test_jacobian_view" did not show differences between hand-coded and finite difference Jacobians
as it claims
Closes #252
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| #
0ed19bb1
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| 29-Oct-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'barry/feature-options-associated-with-object' [PR #1194]
* barry/feature-options-associated-with-object:
Complete support for individual PETSc objects to use their own options database
Merge branch 'barry/feature-options-associated-with-object' [PR #1194]
* barry/feature-options-associated-with-object:
Complete support for individual PETSc objects to use their own options database with PetscObjectSetOptions()
show more ...
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| #
4dde8bb0
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| 26-Oct-2018 |
Matthew G. Knepley <knepley@gmail.com> |
SNES: If routine to compute matrix is missing, look in DMSNES of parent
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| #
2b93b426
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| 26-Oct-2018 |
Matthew G. Knepley <knepley@gmail.com> |
SNES: Slight reformatting, and removal of inactive check
|