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170be9ae
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| 16-Oct-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-dmda-section
* master: (397 commits)
PetscSynchronizedFGets: fix deadlock at EOF
Compiler: Fix warnings from MPI impls which do not initialize outputs
Merge branch 'master' into knepley/feature-dmda-section
* master: (397 commits)
PetscSynchronizedFGets: fix deadlock at EOF
Compiler: Fix warnings from MPI impls which do not initialize outputs
Increase patchlevel to 3.4.3
SNES: Now work vectors come from the DM
SNES ex62: Remove code generation
SNES: Move setup involving snes->vec_sol from SNESSetUp() to SNESolve()
Compiler: Fix warnings from MPI impls which do not initialize outputs
DMPlex ex7: Added missing test output
SNES ex52: Removed old Jacobian stuff, and fixed call to DMPlexProjectFunction() - Fixed calls for new element handling
SNES ex12: Added a performance profiling mode
DMPlex ex8: Fixed leak
PetscSection: Must reset the section when changing the number of fields
DMPlex ex7: Fixed test output - Corrected orientations in interpolation
DMPlex ex1: Fixed test output - Uniform refinement for quads changed
DMPlex: Fix overagressive checks
PC: Removed support graph PC
configure: both downloadonWindows and worksonWindows refer to MS compilers. Also fix isWindows() -> isWindows(CC).
MatXAIJSetPreallocation: use array[] notation to help out Fortran
__float128: when blas/lapack is not found instruct using f2cblaslapack
Configure: Package.downloadonWindows is supposed to mean that Windows compilers work. not Cygwin - Also changed doc for Package.worksonWindows, which does refer to Cygwin
...
Conflicts:
src/dm/impls/da/dalocal.c
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16407d4f
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| 09-Oct-2013 |
Peter Brune <brune@mcs.anl.gov> |
Merge branch 'master' into prbrune/mat-matcolor
Conflicts:
src/snes/interface/snesj2.c
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f86b9fba
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| 09-Oct-2013 |
Hong Zhang <hzhang@mcs.anl.gov> |
add MatFDColoringSetUp(); rename MatFDColoringCreate_xxx -> MatFDColoringSetUp_xxx
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b558a815
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| 08-Oct-2013 |
Shri Abhyankar <abhyshr@mcs.anl.gov> |
Merge branch 'barry/dmvecmattypes' into shri/feature-dm-circuit
Conflicts:
src/dm/impls/makefile
src/dm/interface/dmregall.c
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32029c4c
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| 06-Oct-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-refine-3d
* master: (149 commits)
Bib: Added papers referencing PETSc from ResearchGate
Bib: Fixed urls for some refs Suggested-by: Michele De Ste
Merge branch 'master' into knepley/feature-plex-refine-3d
* master: (149 commits)
Bib: Added papers referencing PETSc from ResearchGate
Bib: Fixed urls for some refs Suggested-by: Michele De Stefano
fixed bug that has appeared recently of false positive errors when there are zero local equations on coarse grids in gamg-agg.
MatSchurComplement: Must initialize KSP package
bib: fix inbook citation
Bib: Updated some refs
SNES: fix copy/paste in man page
fortran: fix KSPCONVERGEDDEFAULT and SNESCONVERGEDSKIP in fortran includes
Mat SBAIJ: avoid invalid memory read in MatSOR_SBAIJ
Revert "MatMPIBAIJSetPreallocationCSR() handled the input matrix entries incorrectly, it treated them as if each row of values"
PCGAMG: fix corruption for multiple solves when MatSetNearNullSpace is used
PCGAMG: remove distracting comment
KSP ex49: restrict near-null space for elasticity example with sym BC
MatMPIBAIJSetPreallocationCSR() handled the input matrix entries incorrectly, it treated them as if each row of values was provided ordered by row within the block rows instead of by block as it was originally designed to be. Also added more discussion to the manual pages on the expected order of the values
Fix accidental creation of the matrices in SNESNCG used for linear analogue LS.
PCGAMG: add man page for PCGAMGType
fortran: fix snesconvergedskip_() kspconvergedskip_() kspconvergeddefault*_()
rm //
Sys: new_ir changed from PetscInt to PetscObjectState - so fix mallocs to use the new type
SNES: Fixed package init in SNESLineSearchCreate()
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Conflicts:
include/petscdmplex.h
src/dm/impls/plex/examples/tests/ex5.c
src/dm/impls/plex/plex.c
src/dm/interface/dm.c
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93cf2482
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| 02-Oct-2013 |
Jed Brown <jedbrown@mcs.anl.gov> |
Merge branch 'barry/dmvecmattypes'
The MatType argument is removed from DMCreateMatrix(), you can use
DMSetMatType() to indicate the type you want used with a DM, defaults to
MATAIJ.
* barry/dmvecm
Merge branch 'barry/dmvecmattypes'
The MatType argument is removed from DMCreateMatrix(), you can use
DMSetMatType() to indicate the type you want used with a DM, defaults to
MATAIJ.
* barry/dmvecmattypes:
DMPlex ExodusII: fix dm->vectype pointer syntax
removed use of VecSetFromOptions() all over the placed, instead use MatGetVecs() or use dm->vectype to determine type added DMGetVecType() and DMGetMatTYpe()
removed MatType argument from DMCreateMatrix() and DMCreateColoring() since information is obtained from DM
Conflicts:
src/dm/impls/da/fdda.c
src/dm/impls/plex/plex.c
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cc85fe4d
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| 04-Sep-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/dmvecmattypes' into barry/saws
Needed to work with version of PETSc that did not have constant calls to VecSetFromOptions() etc
Conflicts:
src/ksp/ksp/interface/ams/kspams.c
s
Merge branch 'barry/dmvecmattypes' into barry/saws
Needed to work with version of PETSc that did not have constant calls to VecSetFromOptions() etc
Conflicts:
src/ksp/ksp/interface/ams/kspams.c
src/snes/impls/composite/snescomposite.c
src/snes/impls/gs/snesgs.c
src/snes/impls/nasm/nasm.c
src/snes/impls/ngmres/snesngmres.c
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b412c318
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| 03-Sep-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
removed MatType argument from DMCreateMatrix() and DMCreateColoring() since information is obtained from DM
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4042b796
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| 17-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'master' into jed/ts-eimex
Sync to include Git conversion, PETSC_EXTERN, and minor API changes.
Conflicts:
src/ts/interface/tsregall.c
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ce94432e
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| 13-Feb-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
added PetscObjectComm() and used it to replace (((PetscObject)obj)->comm)
Hg-commit: 3da37c458124ad48ae939f4e9823e4430ee0b8be
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0298fd71
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| 08-Feb-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
removed PETSC_NULL from C and Fortran (except declaration in C for backward compatibility). Kept PETSC_NULL_xxx for Fortran
Fixed a few bugs where PETSC_NULL had been used incorrectly.
Hg-commit: 05
removed PETSC_NULL from C and Fortran (except declaration in C for backward compatibility). Kept PETSC_NULL_xxx for Fortran
Fixed a few bugs where PETSC_NULL had been used incorrectly.
Hg-commit: 054705a517d7f4388a8a084415d7478cbe95dff4
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d2c146c7
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| 30-Jan-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
commit after merge
Hg-commit: ebb357f10b0c83746021a2f5d6008cb620ae37d0
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f5af7f23
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| 30-Jan-2013 |
Karl Rupp <rupp@mcs.anl.gov> |
Uncrustified src/snes/*
Hg-commit: 0b89af55379cc95040ca47c4c1f8000d6a978df2
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1aa26658
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| 30-Jan-2013 |
Karl Rupp <rupp@mcs.anl.gov> |
Uncrustified parts of src/snes/*
Hg-commit: c338118f302c917361be863cb61bfa992de8f769
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140e18c1
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| 15-Jan-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
removed silly abreviations
Hg-commit: 0641f9ef776cf11cc3336b494981da756bf9d14f
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b769355b
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| 31-Dec-2012 |
Jed Brown <jed@59A2.org> |
merge PetscSF implementation
Hg-commit: 98dccc99445b69cb7a66312149eb16fec359e294
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5a4671ae
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| 30-Dec-2012 |
Barry Smith <bsmith@mcs.anl.gov> |
removed trailing spaces from all files
Hg-commit: 1cfa55059afe46c5145e0e830cd797b97216abfb
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22c6f798
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| 29-Nov-2012 |
Barry Smith <bsmith@mcs.anl.gov> |
updated DMSNES to be a real boy, uhhh, a real PETSc object
Hg-commit: 120edb08eb7981a382ad3ceea1267705f59d8266
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38aa3a79
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| 28-Nov-2012 |
Jed Brown <jed@59A2.org> |
merge VTU viewer
Hg-commit: f68babcf040286d4843b3544bb1e887ce1a50948
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942e3340
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| 28-Nov-2012 |
Barry Smith <bsmith@mcs.anl.gov> |
fixed naming of KSPDM, SNESDM, TSDM and child objects, fixed DMXXYYYContextZZZ() to DMGet/CopyDMXXX()
Hg-commit: a8931f032682db8d679ab51da5c3819b9c32b632
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bdbbd646
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| 27-Nov-2012 |
Richard Tran Mills <rmills@ornl.gov> |
Automerge.
Hg-commit: 7aece89cbfcc2d8ec28613bbf68580206dd8ce11
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b2270762
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| 27-Nov-2012 |
Barry Smith <bsmith@mcs.anl.gov> |
removed debugging code for DMSNESSetFunction/JacobianLocal()
Hg-commit: fc3b500b4793fa4f9a90ca01e4403f4be2ecc417
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ff35dfed
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| 27-Nov-2012 |
Barry Smith <bsmith@mcs.anl.gov> |
added DMSNESSetFunction/JacobianLocal() and converted Matt's examples that use DMSetLocalFunction/Jacobian() to use it
left in #ifdef and print statements for debugging, will remove in next commit
H
added DMSNESSetFunction/JacobianLocal() and converted Matt's examples that use DMSetLocalFunction/Jacobian() to use it
left in #ifdef and print statements for debugging, will remove in next commit
Hg-commit: 300db2374b8c49ea2431500382b080f85a3cf887
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