chkerr and friends wrapped

Merge branch 'barry/2022-03-20/rm-petsccheckfalse-tao' into 'main'

Remove use of PetscCheckFalse() from Tao

See merge request petsc/petsc!4998

Remove use of PetscCheckFalse() from Tao

Commit-type: error-checking, housekeeping
/spend 45m

Merge branch 'barry/2022-03-13/fix-some-manualpages/release' into 'main'

Improve generation of manual pages/fix a variety of manul pages basic formatting

See merge request petsc/petsc!4969

doc: Fix a variety of manual page formatting issues

/spend 1h

doc: fix References: section

Notation:
. * - text
or
. year - text

Merge branch 'stefanozampini/tao-python' into 'main'

TAOPYTHON

See merge request petsc/petsc!4768

TAO: add TAOPYTHON class

deprecate Tao basic API to match SNES and TS paradigms
TaoSetFromOptions: call TaoLineSearchSetFromOptions

Merge branch 'jacobf/2022-01-05/c99' into 'main'

Feature: C99 and C++11

See merge request petsc/petsc!4700

rename PetscAssert() -> PetscCheck() and PetscAssertDebug() -> PetscAssert()

add PetscAssert() and PetscAssertFalse()

Merge remote-tracking branch 'origin/jose/fix-manpages'

Fix manpages to avoid errors reported by doctext

See merge request petsc/petsc!4309

Fix manpages: Input/Output Parameter --> Parameters

Merge branch 'jose/spelling-errors' into 'main'

Fix many spelling errors in manpages and comments

See merge request petsc/petsc!4283

Fix spelling errors in manpages and comments

Merge branch 'barry/2021-06-08/fix-setterrq-chkerrq' into 'main'

Removed CHKERRQ() that come immediately after SETERRQ(), add test to...

See merge request petsc/petsc!4069

Removed CHKERRQ() that come immediately after SETERRQ(), add test to checkbadSource() to find such constructs

Commit-type: bug-fix, error-checking
\spend 10m
Reported-by: Lisandro Dalcin <dalcinl@gm

Removed CHKERRQ() that come immediately after SETERRQ(), add test to checkbadSource() to find such constructs

Commit-type: bug-fix, error-checking
\spend 10m
Reported-by: Lisandro Dalcin <dalcinl@gmail.com>

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Merge branch 'barry/2021-05-16/fix-double-lines' into 'main'

Fix typos in source

See merge request petsc/petsc!3984

Remove all double blank lines from source

Commit-type: petsc-style
/2h

Merge branch 'barry/2020-08-16/fix-source-formatting' into 'master'

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

See merge request petsc/petsc

Merge branch 'barry/2020-08-16/fix-source-formatting' into 'master'

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

See merge request petsc/petsc!3064

show more ...

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

Commit-type: portability-fix, testing-fix, style-fix, feature, maintainability
/spend 1.5h

Merge branch 'stefanozampini/feature-add-hpackages-rebased' into 'master'

Fixes to MatProduct + many bug fixes + new hierarchical matrix support

See merge request petsc/petsc!2800

Fix misuse of PETSC_COMM_WORLD in library code

There are still many left, I'm tired of fixing them

[szampini@localhost petsc]$ git grep PETSC_COMM_WORLD | grep -v tests | grep -v tutorials | grep '

Fix misuse of PETSC_COMM_WORLD in library code

There are still many left, I'm tired of fixing them

[szampini@localhost petsc]$ git grep PETSC_COMM_WORLD | grep -v tests | grep -v tutorials | grep '\.c' | awk '{print $1}' | uniq
src/benchmarks/streams/CUDAVersion.cu:
src/benchmarks/streams/SSEVersion.c:
src/contrib/fun3d/comp/flow.c:
src/contrib/fun3d/incomp/flow.c:
src/dm/impls/forest/p4est/petsc_p4est_package.c:
src/dm/impls/moab/dmmbfem.cxx:
src/dm/impls/moab/dmmbmg.cxx:
src/dm/impls/moab/dmmbutil.cxx:
src/dm/impls/moab/dmmbvec.cxx:
src/dm/impls/moab/dmmoab.cxx:
src/dm/impls/network/network.c:
src/dm/impls/stag/stag.c:
src/dm/impls/stag/stag1d.c:
src/dm/impls/stag/stag2d.c:
src/dm/impls/stag/stag3d.c:
src/dm/impls/stag/stagda.c:
src/dm/impls/stag/stagutils.c:$
src/dm/impls/swarm/data_ex.c:
src/dm/impls/swarm/swarm.c:
src/dm/impls/swarm/swarm_migrate.c:
src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c:
src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c:
src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c:
src/ksp/ksp/impls/tsirm/tsirm.c:
src/ksp/ksp/interface/itcreate.c:
src/ksp/ksp/interface/iterativ.c:
src/ksp/ksp/interface/saws/kspsaws.c:
src/ksp/pc/impls/bddc/bddcfetidp.c:
src/ksp/pc/impls/fieldsplit/fieldsplit.c:
src/ksp/pc/impls/gamg/util.c:
src/ksp/pc/impls/gasm/gasm.c:
src/ksp/pc/impls/is/nn/nn.c:
src/ksp/pc/impls/patch/pcpatch.c:
src/ksp/pc/impls/tfs/gs.c:
src/ksp/pc/impls/tfs/tfs.c:
src/ksp/pc/impls/tfs/xxt.c:
src/ksp/pc/impls/tfs/xyt.c:
src/ksp/pc/interface/precon.c:
src/mat/impls/aij/mpi/mpiaij.c:#define
src/mat/interface/matrix.c:
src/mat/interface/matrix.c:.
src/mat/interface/matrix.c:
src/mat/interface/matrix.c:$
src/mat/utils/multequal.c:
src/snes/interface/saws/snessaws.c:
src/snes/interface/snes.c:
src/sys/classes/draw/interface/drawreg.c:
src/sys/classes/random/interface/random.c:
src/sys/classes/random/interface/randomc.c:
src/sys/classes/viewer/impls/ams/ams.c:
src/sys/classes/viewer/impls/ams/amsopen.c:
src/sys/classes/viewer/impls/ascii/vcreatea.c:
src/sys/classes/viewer/impls/mathematica/mathematica.c:
src/sys/dll/reg.c:
src/sys/dll/reg.c:static
src/sys/dll/reg.c:
src/sys/error/adebug.c:
src/sys/error/checkptr.c:
src/sys/error/errstop.c:
src/sys/error/pstack.c:
src/sys/error/signal.c:
src/sys/ftn-custom/zutils.c:
src/sys/info/verboseinfo.c:
src/sys/logging/plog.c:
src/sys/logging/utils/eventlog.c:
src/sys/logging/xmllogevent.c:
src/sys/memory/mal.c:
src/sys/memory/mtr.c:
src/sys/objects/aoptions.c:
src/sys/objects/aoptions.c:+
src/sys/objects/aoptions.c:
src/sys/objects/ftn-custom/zstart.c:
src/sys/objects/ftn-custom/zstartf.c:
src/sys/objects/inherit.c:
src/sys/objects/init.c:
src/sys/objects/options.c:+
src/sys/objects/options.c:
src/sys/objects/pinit.c:MPI_Comm
src/sys/objects/pinit.c:
src/sys/utils/mpitr.c:
src/sys/utils/mpits.c:+
src/sys/utils/pbarrier.c:
src/sys/utils/pdisplay.c:
src/sys/yaml/yamlimpls.c:
src/sys/yaml/yamlimpls.c:+
src/sys/yaml/yamlimpls.c:
src/tao/pde_constrained/impls/lcl/lcl.c:
src/ts/interface/ts.c:
src/vec/is/is/utils/iscoloring.c:
src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx:
src/vec/vec/interface/vector.c:.
src/vec/vec/interface/vector.c:

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Merge remote-tracking branch 'origin/dalcinl/fix-null'

TS/SNES/Tao: Fix 0 ->NULL for pointers

See merge request petsc/petsc!2783

Tao: Replace 0 -> NULL for pointers