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7e8837e9
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| 09-Sep-2018 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/fix-superdm-is
* master: (123 commits) Fix a few more Fortran objects to have their NULL value match the C NULL value remove dead code Add variable point blo
Merge branch 'master' into knepley/fix-superdm-is
* master: (123 commits) Fix a few more Fortran objects to have their NULL value match the C NULL value remove dead code Add variable point block Jacobi for MPIAIJ matrix. should not pass user contexts through CHKFORTRANNULLOBJECT in Fortran stubs fix mpiuni test Remove CHKFORTRANNULLOBJECTDEREFERENCE since it is no longer needed with Fortran null equal to C null PETSCFEOPENCL: declare PetscFEGetTabulation_Basic as external PETSCFEOPENCL: declare PetscFESetUp_Basic as external Change Fortran null pointer to match C null pointer one more fix jenkins: run 'cleantest' after examples are run - to recover diskspace logical order bug in diagbrdn update fixed, tests updated again replace new -petscspace_order instances with -petscspace_degree PETSCSPACETENSOR: clear up naming confusion of subspaces regression.py: remove configure code related to old test suite - now that SLEPc no longer needs it PetscSpaceSetup_Poly(): make idempotent Plex ex3: update tests Lift changes to defunct dtfe.c from [PR #1074] PetscSpace_Tensor: clarification of vector-valued PetscSpace_Tensor: allow height subspaces, fixes tabulation initialization ...
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5d206e24
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| 09-Sep-2018 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/hongzh/rename-bsi'
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e49d4f37
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| 07-Sep-2018 |
Hong Zhang <hongzhang@anl.gov> |
Rename BSI to BASICSYMPLECTIC
Funded-by: Project: PETSc time integration Time: 2.3 hours Reported-by: Matthew Knepley <knepley@buffalo.edu> Barry Smith <bsmith@mcs.anl.gov> Thanks-to:
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7489efa5
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| 07-Sep-2018 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-pc-patch
* master: (131 commits) fix mpiuni test PETSCFEOPENCL: declare PetscFEGetTabulation_Basic as external PETSCFEOPENCL: declare PetscFESetUp_Ba
Merge branch 'master' into knepley/feature-pc-patch
* master: (131 commits) fix mpiuni test PETSCFEOPENCL: declare PetscFEGetTabulation_Basic as external PETSCFEOPENCL: declare PetscFESetUp_Basic as external one more fix jenkins: run 'cleantest' after examples are run - to recover diskspace logical order bug in diagbrdn update fixed, tests updated again replace new -petscspace_order instances with -petscspace_degree PETSCSPACETENSOR: clear up naming confusion of subspaces regression.py: remove configure code related to old test suite - now that SLEPc no longer needs it PetscSpaceSetup_Poly(): make idempotent Plex ex3: update tests Lift changes to defunct dtfe.c from [PR #1074] PetscSpace_Tensor: clarification of vector-valued PetscSpace_Tensor: allow height subspaces, fixes tabulation initialization PetscSpace: add a dimension member PetscSpaceSetDegree(): now take maxDegree argument -petscspacepoly_tensor -> -petscspace_type tensor PetscSpaceEvaluate_Polynomial(): fix temp array dependencies PETSCSPACETENSOR: A generic tensor product of spaces. PetscSpace: -petscspace_order -> -petscspace_degree ...
Conflicts: src/dm/dt/interface/dtfe.c src/snes/examples/tutorials/ex13.c src/snes/examples/tutorials/ex17.c src/snes/examples/tutorials/ex62.c src/snes/examples/tutorials/output/ex62_bddc_quad.out src/snes/examples/tutorials/output/ex62_fetidp_2d_quad.out src/snes/examples/tutorials/output/ex62_fetidp_2d_tri.out src/snes/examples/tutorials/output/ex62_fetidp_3d_hex.out src/snes/examples/tutorials/output/ex62_fetidp_3d_tet.out
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c86da64b
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| 06-Sep-2018 |
Joseph Pusztay <josephpu@buffalo.edu> |
Merged petsc/petsc into master
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d0187f8a
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| 04-Sep-2018 |
Karl Rupp <me@karlrupp.net> |
Merge branch 'hongzh/symplectic-integrator' [PR #1049]
* hongzh/symplectic-integrator: This branch implements symplectic time integrators.
We should come up with a unifying framework that works for
Merge branch 'hongzh/symplectic-integrator' [PR #1049]
* hongzh/symplectic-integrator: This branch implements symplectic time integrators.
We should come up with a unifying framework that works for all multi- methods such as multirate methods (see PR #1043). The idea of this branch is to ask users to provide a two-way splitting of the separable Hamiltonian system.
TSGetRHSFunctionSplit2w(TS ts,Vec *r,TSRHSFunctionSplit2w *fun1,TSRHSFunctionSplit2w *fun2,void **ctx) TSSetRHSFunctionSplit2w(TS ts,Vec r,TSRHSFunctionSplit2w fun1,TSRHSFunctionSplit2w fun2,void *ctx)
The split/partitioned functions typically have an output vector that has lower DOF. For example, RHSFunction() represents a mapping Rn → Rn , but RHSFunctionSplit2w() provides a mapping Rn → Rn/2 since the subvector is always half of the combined vector. This is also why I use nested vectors for simplicity.
Using IS is a more general way to support multi-way splitting. I am not sure if we should use IS instead of nested vectors for symplectic integrators. Perhaps we can keep both approaches.
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6bd7aeb5
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| 23-Sep-2016 |
Hong Zhang <hongzhang@anl.gov> |
refactor bsi and add the stormer verlet method
wikipedia is wrong about the order of updating p and p
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d9194312
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| 19-Sep-2016 |
Hong Zhang <hongzhang@anl.gov> |
Add the first symplectic integrator SIEuler
The interface is designed particularly for separable Hamiltonian systems
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