PetscInitialize() and PetscFinalize() wrapped:- ierr = PetscInitialize();if (ierr) return ierr;+ CHKERRQ(PetscInitialize());- ierr = PetscFinalize();- return ierr;+ CHKERRQ(PetscFinalize());+
PetscInitialize() and PetscFinalize() wrapped:- ierr = PetscInitialize();if (ierr) return ierr;+ CHKERRQ(PetscInitialize());- ierr = PetscFinalize();- return ierr;+ CHKERRQ(PetscFinalize());+ return 0;
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chkerr and friends wrapped
Remove use of PetscCheckFalse() from TaoCommit-type: error-checking, housekeeping/spend 45m
TAO: add TAOPYTHON classdeprecate Tao basic API to match SNES and TS paradigmsTaoSetFromOptions: call TaoLineSearchSetFromOptions
rename PetscAssert() -> PetscCheck() and PetscAssertDebug() -> PetscAssert()
add PetscAssert() and PetscAssertFalse()
make PetscInfo() variadic
SETERRQ[1-9]+ begone
Unify XXGetYYContext callsalways use void*
Update badsource rules- Zero or more spaces are not allowed for more returning types- zero spaces not allowed for for|if|while
Remove all double blank lines from sourceCommit-type: petsc-style/2h
Fix code that did not pass appropriate PETSc error flags to SETERRQ()Add checkbadSource check for use of SETERRQ() without an appropriate error flagCommit-type: error-checking, bug-fix, testing-f
Fix code that did not pass appropriate PETSc error flags to SETERRQ()Add checkbadSource check for use of SETERRQ() without an appropriate error flagCommit-type: error-checking, bug-fix, testing-fix, style-fix/spend 2.5h
Convert MPI error type to PETSc error with string message for all MPI callsNow PETSc examples will ONLY return PETSc error codes and never MPI error codes directly so we can understand and post-pro
Convert MPI error type to PETSc error with string message for all MPI callsNow PETSc examples will ONLY return PETSc error codes and never MPI error codes directly so we can understand and post-process their errors better.The test harness will now automatically retry tests that fail with MPI, this may help with Intel MPI that produces seemingly random failures.Commit-type: error-checking/spend 30m
Turn on checkbadSource test to generate an error when found; fix all source code that causes errorsCommit-type: portability-fix, testing-fix, style-fix, feature, maintainability/spend 1.5h
Fix misuse of PETSC_COMM_WORLD in library codeThere are still many left, I'm tired of fixing them[szampini@localhost petsc]$ git grep PETSC_COMM_WORLD | grep -v tests | grep -v tutorials | grep '
Fix misuse of PETSC_COMM_WORLD in library codeThere are still many left, I'm tired of fixing them[szampini@localhost petsc]$ git grep PETSC_COMM_WORLD | grep -v tests | grep -v tutorials | grep '\.c' | awk '{print $1}' | uniqsrc/benchmarks/streams/CUDAVersion.cu:src/benchmarks/streams/SSEVersion.c:src/contrib/fun3d/comp/flow.c:src/contrib/fun3d/incomp/flow.c:src/dm/impls/forest/p4est/petsc_p4est_package.c:src/dm/impls/moab/dmmbfem.cxx:src/dm/impls/moab/dmmbmg.cxx:src/dm/impls/moab/dmmbutil.cxx:src/dm/impls/moab/dmmbvec.cxx:src/dm/impls/moab/dmmoab.cxx:src/dm/impls/network/network.c:src/dm/impls/stag/stag.c:src/dm/impls/stag/stag1d.c:src/dm/impls/stag/stag2d.c:src/dm/impls/stag/stag3d.c:src/dm/impls/stag/stagda.c:src/dm/impls/stag/stagutils.c:$src/dm/impls/swarm/data_ex.c:src/dm/impls/swarm/swarm.c:src/dm/impls/swarm/swarm_migrate.c:src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c:src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c:src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c:src/ksp/ksp/impls/tsirm/tsirm.c:src/ksp/ksp/interface/itcreate.c:src/ksp/ksp/interface/iterativ.c:src/ksp/ksp/interface/saws/kspsaws.c:src/ksp/pc/impls/bddc/bddcfetidp.c:src/ksp/pc/impls/fieldsplit/fieldsplit.c:src/ksp/pc/impls/gamg/util.c:src/ksp/pc/impls/gasm/gasm.c:src/ksp/pc/impls/is/nn/nn.c:src/ksp/pc/impls/patch/pcpatch.c:src/ksp/pc/impls/tfs/gs.c:src/ksp/pc/impls/tfs/tfs.c:src/ksp/pc/impls/tfs/xxt.c:src/ksp/pc/impls/tfs/xyt.c:src/ksp/pc/interface/precon.c:src/mat/impls/aij/mpi/mpiaij.c:#definesrc/mat/interface/matrix.c:src/mat/interface/matrix.c:.src/mat/interface/matrix.c:src/mat/interface/matrix.c:$src/mat/utils/multequal.c:src/snes/interface/saws/snessaws.c:src/snes/interface/snes.c:src/sys/classes/draw/interface/drawreg.c:src/sys/classes/random/interface/random.c:src/sys/classes/random/interface/randomc.c:src/sys/classes/viewer/impls/ams/ams.c:src/sys/classes/viewer/impls/ams/amsopen.c:src/sys/classes/viewer/impls/ascii/vcreatea.c:src/sys/classes/viewer/impls/mathematica/mathematica.c:src/sys/dll/reg.c:src/sys/dll/reg.c:staticsrc/sys/dll/reg.c:src/sys/error/adebug.c:src/sys/error/checkptr.c:src/sys/error/errstop.c:src/sys/error/pstack.c:src/sys/error/signal.c:src/sys/ftn-custom/zutils.c:src/sys/info/verboseinfo.c:src/sys/logging/plog.c:src/sys/logging/utils/eventlog.c:src/sys/logging/xmllogevent.c:src/sys/memory/mal.c:src/sys/memory/mtr.c:src/sys/objects/aoptions.c:src/sys/objects/aoptions.c:+src/sys/objects/aoptions.c:src/sys/objects/ftn-custom/zstart.c:src/sys/objects/ftn-custom/zstartf.c:src/sys/objects/inherit.c:src/sys/objects/init.c:src/sys/objects/options.c:+src/sys/objects/options.c:src/sys/objects/pinit.c:MPI_Commsrc/sys/objects/pinit.c:src/sys/utils/mpitr.c:src/sys/utils/mpits.c:+src/sys/utils/pbarrier.c:src/sys/utils/pdisplay.c:src/sys/yaml/yamlimpls.c:src/sys/yaml/yamlimpls.c:+src/sys/yaml/yamlimpls.c:src/tao/pde_constrained/impls/lcl/lcl.c:src/ts/interface/ts.c:src/vec/is/is/utils/iscoloring.c:src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx:src/vec/vec/interface/vector.c:.src/vec/vec/interface/vector.c:
Single petscdir.mk
PetscOptionsBegin: Title argument made obligatoryto avoid (null) headers in -help output.Additionally* PetscOptionsBegin() inarg validation* fix a few examples which break this* fix TaoMatGetS
PetscOptionsBegin: Title argument made obligatoryto avoid (null) headers in -help output.Additionally* PetscOptionsBegin() inarg validation* fix a few examples which break this* fix TaoMatGetSubMat() to use PetscObjectOptionsBegin() instead of PetscOptionsBegin()* fix weird position of PetscOptionsEnd() in TAO examples
Provide support for not setting PETSC_DIR when gnumake is being used; this will prevent some petsc-maint/petsc-users email threadsCommit-type: error-checking, testing-fix, feature, exampleThanks-t
Provide support for not setting PETSC_DIR when gnumake is being used; this will prevent some petsc-maint/petsc-users email threadsCommit-type: error-checking, testing-fix, feature, exampleThanks-to: Jed Brown <jed@jedbrown.org>Thanks-to: Lisandro Dalcin <dalcinl@gmail.com>
Merge branch 'jed/promote-examples-tests-tutorials' [petsc/petsc!2610]* jed/promote-examples-tests-tutorials: Promote examples/{tests,tutorials}/ to {tests,tutorials}/
This branch reorganizes the API of mat-mat operations: A*B, At*B, A*Bt, PtAP, RARt, A*B*C- See matproduct.c for detailed description of new API- removed API function XXXSymbolic() and XXXNumeric()
This branch reorganizes the API of mat-mat operations: A*B, At*B, A*Bt, PtAP, RARt, A*B*C- See matproduct.c for detailed description of new API- removed API function XXXSymbolic() and XXXNumeric()- removed subroutines MatMatMult_xxx, MatPtAP_xxx, ...- modified MatxxxSymbolic_XXX() prototype (product is an input now)- selection of algorithm is in MatProductSetFromOptions_xxx()
Promote examples/{tests,tutorials}/ to {tests,tutorials}/This shortens paths and improves consistency between test target namesand paths to the source and output files. Most of the work wascompl
Promote examples/{tests,tutorials}/ to {tests,tutorials}/This shortens paths and improves consistency between test target namesand paths to the source and output files. Most of the work wascompleted by this script, followed by mild cleanup of nonconformingcases.for makefile in `git ls-files 'src/*makefile'`; do if rg -q 'DIRS.*\bexamples\b' $makefile; then base=$(dirname $makefile) dirs=$(cd $base/examples && ls -d tests tutorials 2>/dev/null | xargs echo) perl -pi -e "s#^(DIRS.*)\bexamples\b#\1${dirs}#" $makefile git rm $base/examples/makefile for t in $dirs; do git mv $base/examples/$t $base/ perl -pi -e "s#^(LOCDIR[[:space:]]*=).*#\1 $base/$t/#" $base/$t done fidonegit grep -l -E -z 'examples/(tutorials|tests)' | xargs -0 perl -pi -e 's#examples/(tutorials|tests)#\1#g'git checkout @ \ src/docs/website/documentation/changes/ \ src/benchmarks/results/
MatAXPY_Basic: MATSHELL supports AXPY with X not of type MATSHELL
TAO: remove references to removed API from the code
Double CHKERRQ
Remove legacy and cmake compile systems- Remove legacy and cmake compile systems from makefiles and config- Clean out various dead code from makefile and lib/petsc/conf/rules- Update lib/petsc/co
Remove legacy and cmake compile systems- Remove legacy and cmake compile systems from makefiles and config- Clean out various dead code from makefile and lib/petsc/conf/rules- Update lib/petsc/conf/test to build all examples, not just those beginning with ex, update examples makefiles to remove now unneeded rules- Deprecated make gnumake, replaced with make libsNote: retained clean-legacy since it is used by clean in rulesCommit-type: style-fix, featureThanks-to: Jed Brown <jed@jedbrown.org> and Satish Balay <balay@mcs.anl.gov>
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